FMO11663.5prime Sequence
799 bp (795 high quality bases) assembled on 2012-05-29
> FMO11663.5prime
CAGTCGACATGTTCCAACATTTCAAGCAGATCTATGCTGGGCTGGGTGTC
AGTTCTCTGATGGTCACCCTGGCCATCCTACTGCTCCTTCAGCCCGTGGA
TGCACGCTGGACTCGCAGACCCAGGCGTACCACCACGCCAAGGAGCACCA
CAAGCATAACCACCGCGAATCCGGATCGTCATCAGCATGTGCACCACTGG
CCACCATTGGTGGCACCACCGCCACAGCCTCAACCACAGCCACCAGTGGT
TGTGGTGCAGAAGCCAAGTCACACGGAGACCAGTCCCCGTCTCGTCGATA
GCTTCGATCAGAGATCACTGGACGGGCAGTACGAGTTCAGATATCAGCTG
GATAATGGCAACACGCGATATGAGCGCGCCTACTGGCTGCCCGTGGGCAA
GGATCTCGTTCTGGCCAAGAAGGGATACTATTCGGTGCCACTGCCAAACG
ACAAGTACTCCACGGTGTTCTACACCGCCGATCATCGTGGCTACCATGTG
GACATGCAGACATTATCCGTAGAGCAGCCGCTATTGCCGCGCAGCCTGGA
AGTGCCCGGAGTGGAAAGGGATGTGGGATCGGGAATGGGAATGGGCACCG
GAATAGCCACGGGTACGGGGACTAAGCGAAATTCAATAAGCGACCCGGAG
CGTAACGAGCTGCCTGTGGAAGTGGAAGTGAATGAGGCTGAGGATGTGGA
TGTGGATGTGGACCCAGTGATGCTGGCACCGAGCTGGTTCCTAATGCTTG
TACACCAAGTCCGTAACGAAACCGAACCATTACTTTGGCCATCGATATT
FMO11663.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15756-RA | 1369 | CG15756-RA | 72..865 | 7..799 | 3765 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13534471..13534804 | 7..340 | 1670 | 100 | Plus |
| X | 23542271 | X | 13535098..13535337 | 508..746 | 1135 | 99.2 | Plus |
| X | 23542271 | X | 13534863..13535032 | 338..507 | 850 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:59:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 1967..2036 | 183..250 | 120 | 65.7 | Plus |
FMO11663.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:10 Download gff for
FMO11663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15756-RA | 1..792 | 9..799 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:41 Download gff for
FMO11663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15756-RA | 65..865 | 1..799 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:28 Download gff for
FMO11663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15756-RA | 65..865 | 1..799 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:28 Download gff for
FMO11663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13534464..13534804 | 1..340 | 98 | -> | Plus |
| X | 13534866..13535032 | 341..507 | 100 | -> | Plus |
| X | 13535098..13535336 | 508..745 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:41 Download gff for
FMO11663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13428497..13428837 | 1..340 | 98 | -> | Plus |
| arm_X | 13428899..13429065 | 341..507 | 100 | -> | Plus |
| arm_X | 13429131..13429369 | 508..745 | 99 | -> | Plus |
