Clone FMO11664 Report

Search the DGRC for FMO11664

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:64
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34021-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11664.5prime Sequence

509 bp (509 high quality bases) assembled on 2012-05-29

> FMO11664.5prime
CAGTCGACATGGATGTCACGAAAACATCAAGCGCTGAGGAAACCGAAAAC
ACGGAAAATACTAGTCATGCTAAAAACATTAACGAAAACGTATCAAAATT
TTATGAAACTATTGGAAATATTTCCCGAAATATGCGCAAGGACGATTGGA
CATATCTACAACGCCATCCAGAGATCCGAGCCATAATTCGGGTCATTACA
GCCGAGGCGGTTAAGGCAAAGCCATCGAATATCTACCAATTTACAGCCAA
TTTATTTGGAAGCGAAAGAGACGAGGAGATGGTAGAAAAGATAAACAAGC
AACTTAAGTGGTTGGAAGAGCAGTTGCGAGGGGGTACGTGGAATCCTGAC
GAAGGATGTGCCCCGTTTCCAGAATCCAGCGAGACTTCTTCGGAAACTAA
ATGCCAAACTAATTTTAATACCACTGCGAGTTTCAACATACCCGAAAAGC
AAGTTTGCCCTGAAAATTATAAGCCAGATTGCAAGAAATGTGCAAGCTTT
CTAGACCAT

FMO11664.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:56:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG34021-RA 760 CG34021-RA 98..580 9..491 2415 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:56:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12336987..12337268 9..290 1410 100 Plus
2R 25286936 2R 12337336..12337538 289..491 1015 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:56:15 has no hits.

FMO11664.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:38 Download gff for FMO11664.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34021-RA 2..491 6..495 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:57 Download gff for FMO11664.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34021-RA 90..583 1..495 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:06 Download gff for FMO11664.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34021-RA 90..583 1..495 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:06 Download gff for FMO11664.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12336979..12337268 1..290 98 -> Plus
2R 12337338..12337541 291..495 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:57 Download gff for FMO11664.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8224484..8224773 1..290 98 -> Plus
arm_2R 8224843..8225046 291..495 99   Plus