FMO11665.5prime Sequence
1097 bp (1011 high quality bases) assembled on 2012-05-29
> FMO11665.5prime
CAGTCGACATGTTTGATAATAAAAGCGATAAGCTGCTGCTTGAAATGGAG
GAAGACGATGCTGCTCCCGAGGATCAGCACCCCCGCTGCGAGCACGGGCC
GACGGTTTTGTTCAACCGACAATCCCAACTTCCCGACCAGGGTTATTATG
CCTGTTCAGCCCATCGGGACTCAAAACTCTGCAATTATCACTTGCCAGCG
GATCAGTGGAAGGGTCAGACCACCAGGACGGCACTCACCAAAAGGGACTA
TCCCTTGCCATGCAGGAAACCAGCTAATCCCGCCATTTGTGATCCCACAC
TAAGCCTTACAGCGCTTTCCCAGGACAAAGTCAATGCCCAATACTTTTTT
GATGAAGCTGCGCTCAACTTCTTGGCAAATCAGTGTGAGCATATAGGAGC
TAGCAAGGTTATATGCATGGGCGCACCGCGTCTACACTTCCATCTGCGAC
ACAAATTGCAAAGTTTTCTGTTGGATTTGGATGAGAGATTTGCCGAATAT
CTGGGTCCTGAAGAGTTCTGTCTGTACAATATGTGCAATAATCACTTCTT
TTACGATCGAACGCCCTTTGAACAATTCCTGGCAGGTACCAGTTCCGATC
GACTGGTGATTGTAACAGATCCTCCATTTGGCTGTCGCACTGAACTGATT
TCGCACACCCTGCGCAGCCTTAGAAAACTGCATAATCAAATCAACCGATT
GCCATCCACTCCACTGTCCATATTCTGGATATATCCCTATTATTCAGCTA
ACCACATCAGCAGGAAATGCCTGAGCTTGAAATGTGTGAATACAGGATCC
ATTACACTAATCACCTTAGATATACGAATGTGGGCAAGCAGAGTCGGTTT
TGTGGATCACCCGTGAGCTGTTCACAACGTGCCACTGCGACTTCTTCAAT
TGCCCCCTGAAGAGGGCTATAGTACTGCAAAATGCGATTGTTACCTGCCA
AGAAACCTGCACTGCACGCTGCCGGAAGTGCCCCCTCGGTGATTGCCAAC
GTACAGCCACTGCCAGTCCTGCGACGCTGGGTGAAACCCACTATGTGTAT
TGCCTCGACTGGAAGAAGGTGACCGCGAAAGAAGGTACAAACCTGCT
FMO11665.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:56:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12863-RA | 1417 | CG12863-RA | 69..1170 | 9..1097 | 4815 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:56:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14620858..14621252 | 403..9 | 1975 | 100 | Minus |
| 2R | 25286936 | 2R | 14620080..14620566 | 1061..589 | 1585 | 94.1 | Minus |
| 2R | 25286936 | 2R | 14620618..14620808 | 592..402 | 955 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:56:18 has no hits.
FMO11665.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:39 Download gff for
FMO11665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12863-RA | 57..1069 | 1..1005 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:59 Download gff for
FMO11665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12863-RA | 65..1077 | 1..1005 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:08 Download gff for
FMO11665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12863-RA | 65..1077 | 1..1005 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:08 Download gff for
FMO11665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14620138..14620562 | 593..1005 | 96 | <- | Minus |
| 2R | 14620618..14620806 | 404..592 | 100 | <- | Minus |
| 2R | 14620858..14621256 | 1..403 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:59 Download gff for
FMO11665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10507643..10508067 | 593..1005 | 96 | <- | Minus |
| arm_2R | 10508123..10508311 | 404..592 | 100 | <- | Minus |
| arm_2R | 10508363..10508761 | 1..403 | 99 | | Minus |
