FMO11666.5prime Sequence
925 bp (901 high quality bases) assembled on 2012-05-29
> FMO11666.5prime
CAGTCGACATGTCAGCGGGTGTGGGTGGCGGAGGGAGCATTACCACCGAG
CACCACAGTCGCCTCTACTTCCTCAACTCGCCGACGGCGCCGCTCACCGC
CCGCGATCCGTTCTTCATCAAGCCGGAGTATCTCAGCTATGAGAGTCCCA
TGCACCATGCCCTCTACTCGGGCAATCGGGGCCTCTTAGAGTACAACAAC
TATACCAGTTCGGCGGCCGCGGCGGCAGCCGTTGCCTCATCCGTAGCCAC
CTCCGTATCTGTGTCCGGTTCGGGTTCGGGATCAGGATCCGCGGGAACCG
CAGCCAGTGCCTCAGCAAGTGCAGCGAACAGCGGTGGCAGTGCGTCTGGA
ACGGCGGTGCTGAGCCTCGAGAACAATTTCGCACAGCAGGGTAATCCCCA
CCAGCAGCAGCAGCAGCAGCAACAGCAGGGCAATCCCCACCATGAGGTAC
TCCAGCAGCAGCAGCAGCAGCACCCCCTGCATCATCATTTGTCCGCTGGC
GTTGTGGTCGAGGCCAGTCAACTTGGTGGCGTTCCGGGTCTTGCCAATCT
TGGCGTGCCACATCTCAGCGCCCAGCAGTCAGTGACGCAGCAGGGCCAAT
CCTCGAGAGCGCAAAAGGCCGCCCGCCGGAGAAGCAACGAATCGATTGAG
GCCAGGGAAAGGCGGCTGGAGAGAAACGCCGCCCGGATGCGGGACAAACG
GGCCAAGGAATCGGAGGCCGAGTACCGCGTGCGTTTGGCCAAGAATGCGG
AGGCGAATCGAGTGCGACCGCCAGAACGAAACGGAAGTACAAAGATCCCT
AAGACTGATTGAAGAATGCAGCGCGGCAGCCGACTGCGCCGCGCCTCGTA
AATCGTCGAAGGAGCGTAGAAAGCGGCTGGCCAATGCCTGCCGAACGGAT
GCTTATCCGCCTGGTCCAGTGCTAC
FMO11666.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14440-RB | 1802 | CG14440-RB | 283..1190 | 9..922 | 4255 | 98.1 | Plus |
| CG14440-RA | 2638 | CG14440-RA | 219..1126 | 9..922 | 4255 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6697397..6698285 | 902..9 | 4115 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:59:04 has no hits.
FMO11666.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:11 Download gff for
FMO11666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14440-RA | 217..1126 | 5..922 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:43 Download gff for
FMO11666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14440-RA | 217..1126 | 5..922 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:31 Download gff for
FMO11666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14440-RA | 217..1126 | 5..922 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:31 Download gff for
FMO11666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6697375..6698287 | 5..925 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:43 Download gff for
FMO11666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6591408..6592320 | 5..925 | 97 | | Minus |
