Clone FMO11671 Report

Search the DGRC for FMO11671

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:71
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG33259-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11671.5prime Sequence

383 bp (383 high quality bases) assembled on 2012-05-29

> FMO11671.5prime
CAGTCGACATGTGGAAGTGGGAAACATTCACTCTTGTGGTACTGTGTAGT
TTTTCGGCGGTAAAGTGCTTTGCTGAGAAAGTCGATTGTTCAGTAAATGG
AACTCAAACGGATTGCCCCACAGCTTGTCCAGAAACGTGTGATACCAAAG
GAAAGCCCAATTGTACTTTGATATGCGGAGGTCCTTGTGTCTGCAAGCCA
GGATATGTTGTCAATAGAATGATTCCTGCCTGTGTACTGCGATCTGATTG
TCCAAAAATCGTATTACAAAGCGACAGAGCCCGAAGACTGACGAATTTCA
ATTGCTTTAGTGGGGAAAATACTTGCACTCAACTAAAACATAGTAGTAGT
AAGCGAAATAATGACGCAAGCTTTCTAGACCAT

FMO11671.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:56:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG33259-RA 436 CG33259-RA 18..374 9..365 1785 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:56:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15407849..15408205 9..365 1785 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:56:09 has no hits.

FMO11671.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:37 Download gff for FMO11671.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33259-RA 1..360 9..369 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:53 Download gff for FMO11671.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33259-RA 18..377 9..369 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:04 Download gff for FMO11671.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33259-RA 18..377 9..369 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:04 Download gff for FMO11671.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15407849..15408208 9..369 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:53 Download gff for FMO11671.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15400949..15401308 9..369 99   Plus