Clone FMO11672 Report

Search the DGRC for FMO11672

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:72
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15307-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11672.5prime Sequence

798 bp (798 high quality bases) assembled on 2012-05-29

> FMO11672.5prime
CAGTCGACATGCAGCCAGGATTTACGGAGCGAATGCGAGACCATCTAATG
CTCATTGAAATTTACGATTATGCTGCGAAATTATTAAACAATATGACCGC
CAGAGGAGTCAGGAATTCAGTGGGAAAATCAGCCGAGAGCCGTACTAAGG
AATCAACAGGGAAATTGGGCAGCCTGCTTGGCCGCACACTGGCCAAAGTG
GCCAAAGTGGCCCGCTCCAATCCCGCCCAGCACGTGACCAATCTGCCCGT
TTCCGCACTCCTGCTCCAGGCCCTCGACGTGGCGGACGTGGCCCGCGGAC
AGGGAATCGATTATCCCATCACTAGCACCACCGGGACCACCTTCAACATT
ATCACCACCACCACCACCACCACCACCACCACCACGGGCAGTGACCCAAC
GGATGTGCTCGGCAGTCAGCCGCCGGCGTTCTCATTTCCCGCCAACGTCA
CTGGAGCACCGGGAAGTGCGGGGAATGCGAACGCATACCTGCCCGCGGGC
AATCTCAGCGGTTTCATCGAATCCTCAACAACGGCGGTGATGAGCACACT
GCCCATACCCACCAGCACCATGGCCACGCTCCAGGCCCAAACGGTGGCCA
CTTTCATCGCCGCCACCGGCAGCAAGAATCGCCCAACGACCATCGTTGTC
TACCCAACGGTTTCACCCGAATCGATTGTCATCCCGATCGTCTCCTGTAT
CTTCGGCTTCCCCATCCTGGCGCTTTCTGGTGATCTGTTGCCTTTCGAAG
GAGGCCAAGTTGGCCAGGGAGAGGGATAGGAGGCGTAACTACGATATG

FMO11672.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG43740-RC 1878 CG43740-RC 101..883 15..798 3850 99.6 Plus
CG43740-RB 1850 CG43740-RB 101..883 15..798 3850 99.6 Plus
CG43740-RA 1878 CG43740-RA 101..883 15..798 3850 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:52
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10335799..10336451 8..660 3265 100 Plus
X 23542271 X 10343870..10344007 660..798 555 95 Plus
Blast to na_te.dros performed on 2014-11-28 02:58:53 has no hits.

FMO11672.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:09 Download gff for FMO11672.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15307-RA 1..705 93..798 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:37 Download gff for FMO11672.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43740-RA 96..883 7..798 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:25 Download gff for FMO11672.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43740-RA 96..883 7..798 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:25 Download gff for FMO11672.5prime
Subject Subject Range Query Range Percent Splice Strand
X 10335793..10336451 1..660 99 -> Plus
X 10343871..10344007 661..798 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:37 Download gff for FMO11672.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10229826..10230484 1..660 99 -> Plus
arm_X 10237904..10238040 661..798 97   Plus