FMO11672.5prime Sequence
798 bp (798 high quality bases) assembled on 2012-05-29
> FMO11672.5prime
CAGTCGACATGCAGCCAGGATTTACGGAGCGAATGCGAGACCATCTAATG
CTCATTGAAATTTACGATTATGCTGCGAAATTATTAAACAATATGACCGC
CAGAGGAGTCAGGAATTCAGTGGGAAAATCAGCCGAGAGCCGTACTAAGG
AATCAACAGGGAAATTGGGCAGCCTGCTTGGCCGCACACTGGCCAAAGTG
GCCAAAGTGGCCCGCTCCAATCCCGCCCAGCACGTGACCAATCTGCCCGT
TTCCGCACTCCTGCTCCAGGCCCTCGACGTGGCGGACGTGGCCCGCGGAC
AGGGAATCGATTATCCCATCACTAGCACCACCGGGACCACCTTCAACATT
ATCACCACCACCACCACCACCACCACCACCACCACGGGCAGTGACCCAAC
GGATGTGCTCGGCAGTCAGCCGCCGGCGTTCTCATTTCCCGCCAACGTCA
CTGGAGCACCGGGAAGTGCGGGGAATGCGAACGCATACCTGCCCGCGGGC
AATCTCAGCGGTTTCATCGAATCCTCAACAACGGCGGTGATGAGCACACT
GCCCATACCCACCAGCACCATGGCCACGCTCCAGGCCCAAACGGTGGCCA
CTTTCATCGCCGCCACCGGCAGCAAGAATCGCCCAACGACCATCGTTGTC
TACCCAACGGTTTCACCCGAATCGATTGTCATCCCGATCGTCTCCTGTAT
CTTCGGCTTCCCCATCCTGGCGCTTTCTGGTGATCTGTTGCCTTTCGAAG
GAGGCCAAGTTGGCCAGGGAGAGGGATAGGAGGCGTAACTACGATATG
FMO11672.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43740-RC | 1878 | CG43740-RC | 101..883 | 15..798 | 3850 | 99.6 | Plus |
CG43740-RB | 1850 | CG43740-RB | 101..883 | 15..798 | 3850 | 99.6 | Plus |
CG43740-RA | 1878 | CG43740-RA | 101..883 | 15..798 | 3850 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10335799..10336451 | 8..660 | 3265 | 100 | Plus |
X | 23542271 | X | 10343870..10344007 | 660..798 | 555 | 95 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:58:53 has no hits.
FMO11672.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:09 Download gff for
FMO11672.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15307-RA | 1..705 | 93..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:37 Download gff for
FMO11672.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43740-RA | 96..883 | 7..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:25 Download gff for
FMO11672.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43740-RA | 96..883 | 7..798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:25 Download gff for
FMO11672.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10335793..10336451 | 1..660 | 99 | -> | Plus |
X | 10343871..10344007 | 661..798 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:37 Download gff for
FMO11672.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10229826..10230484 | 1..660 | 99 | -> | Plus |
arm_X | 10237904..10238040 | 661..798 | 97 | | Plus |