Clone FMO11673 Report

Search the DGRC for FMO11673

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:73
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32832-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11673.5prime Sequence

446 bp (446 high quality bases) assembled on 2012-05-29

> FMO11673.5prime
CAGTCGACATGTCTAAAGGCACGGGACCCTTGTCTAAGTTGTACAATATT
ACCATCAGTACTATTGATAAATTTGTTCCAGGCGCAGTTCAGCCACTTTG
GCAATCCCCAGCTGGACCCCGTACTGTGTTTTTTTGGGCACCAGCGTTTA
AATGGTCCTTGGTGCTGGCTGGGCTGAGCGATACGCTAAGTCGTCCTCCT
GCCAATATATCGCTGAATCAATGCGGCTCCTTGGCAGTCACGGGCTTAAT
TTGGTCTCGCTACTCAGTGGTTATCACACCCAAGAACTACAATCTTCTGG
CCGTCAACATAGCCGTCTTTCTCATCCAGGGTTATCTAATGGTCAAGCAC
CTAAGGTGGCGCAGCGAGAACTCTCGGAATGCGGTGTTCAATCATTCGCA
CTACCCAATCAAATCAGGAGATGATTGGGCAAGCTTTCTAGTTTAT

FMO11673.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:56:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG32832-RB 772 CG32832-RB 75..494 9..428 2100 100 Plus
CG32832-RA 675 CG32832-RA 75..494 9..428 2100 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:56:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16878604..16878877 428..155 1370 100 Minus
2L 23513712 2L 16879110..16879216 115..9 535 100 Minus
2L 23513712 2L 16879017..16879058 155..114 210 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:56:32 has no hits.

FMO11673.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:42 Download gff for FMO11673.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32832-RA 60..482 9..429 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:09 Download gff for FMO11673.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32832-RA 75..501 9..433 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:14 Download gff for FMO11673.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32832-RA 75..501 9..433 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:14 Download gff for FMO11673.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16878597..16878876 156..433 99 <- Minus
2L 16879017..16879057 115..155 100 <- Minus
2L 16879111..16879216 9..114 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:09 Download gff for FMO11673.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16878597..16878876 156..433 99 <- Minus
arm_2L 16879017..16879057 115..155 100 <- Minus
arm_2L 16879111..16879216 9..114 100   Minus