Clone FMO11674 Report

Search the DGRC for FMO11674

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:74
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34283-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11674.5prime Sequence

485 bp (485 high quality bases) assembled on 2012-05-29

> FMO11674.5prime
CAGTCGACATGTCTAAAAGCAACGCATCTGTGGAAGGTCCCCGTTTTGAG
GAGCACCTAGTCTGTTTTTTCGATGGATTACATCGCATATTGCCGCTCGA
TATGAAGACGCACGTGTTGCAGTGCGCCAAGAACTTTCCTTTGGAAAAGT
TGGTGCACTGTCCATATAACTGCGGTCAAATACACTCGGTTGCCGAAATG
GAGAATCATATCAATGATTGTCCAGACCGAGCATATTTGGAGCGCAACAA
TGTGCCTAGTGATGAGTTGCCTTCTTTGGCACAGCGACCGCGTGGTGTTG
AGGTGGAGAGCGAAGAGGATTGGGATGCCGAACCGCCATCTCAGACGTAC
AACCCTAGTCTTCACTGCGAGAGGAGCATGGTTATCCGTACCATACATGG
AGCTACACGATCCGCTCGTCGAGAATTCCGCAAACGCGAGCAAAAGCGAT
TAAATGATTTAAATCCAGCAAGCTTTCTAGACCAT

FMO11674.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:56:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG34283-RA 567 CG34283-RA 69..527 9..467 2250 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:56:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18722007..18722272 467..202 1330 100 Minus
3R 32079331 3R 18722328..18722522 203..9 930 98.5 Minus
Blast to na_te.dros performed on 2014-11-28 02:56:35 has no hits.

FMO11674.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:43 Download gff for FMO11674.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34283-RA 1..462 9..468 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:10 Download gff for FMO11674.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34283-RA 1..462 9..468 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:16 Download gff for FMO11674.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34283-RA 60..527 1..467 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:16 Download gff for FMO11674.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 18722007..18722270 204..467 100 <- Minus
3R 18722328..18722530 1..203 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:10 Download gff for FMO11674.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14547729..14547992 204..467 100 <- Minus
arm_3R 14548050..14548252 1..203 96   Minus