FMO11675.5prime Sequence
506 bp (506 high quality bases) assembled on 2012-05-29
> FMO11675.5prime
CAGTCGACATGCGTCACTTTACCGTGCTAGTATCCTGCATCCTGATAGTT
ATATTGCCATGCGTGTTAGGGGCTCACAGGACAGCTCTCAAGAGTCATTA
TAGAAGCTTTGTGAAACCAAAGCAGAATGTCATACGGGCTAGAACCAATC
AAACAACACAACTTACATTAGGAGACTATACGGAAAACTTTTATAAACAC
TGCATGGATATTTTCAAAGAGAAAAACTTGGTTGGTAAAGTGATCCATGG
CATGATCAGTGGAATTTTAGACAGGCTCAATGAAGTGTGCCTCGACAAGC
CCATTCACCCACTTATCCACAAAGTTTTCACGGAAATCCTTCTCTGTGGC
GGAAGCATGTCGGATGCAATCGATAGCGTCATTGACATATTATTTGGAAA
TTTGGAAAGAAATTGCAGGGAGAGGCCTGGATTCAATAGCTATTATATTT
TAACCAGTGCGGAAAACGAAATAGTTGAATCAAAAGGTGCAAGCTTTCTA
GACCAT
FMO11675.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp84E-RA | 685 | CG42484-RA | 30..509 | 9..488 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7979764..7980241 | 488..11 | 2390 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:59:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rt1b | 5171 | Rt1b RT1B 5150bp | 3972..4068 | 65..161 | 125 | 58.8 | Plus |
FMO11675.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:12 Download gff for
FMO11675.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 30..512 | 9..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:46 Download gff for
FMO11675.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 30..512 | 9..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:36 Download gff for
FMO11675.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 30..512 | 9..492 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:36 Download gff for
FMO11675.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7979760..7980241 | 11..492 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:46 Download gff for
FMO11675.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3805482..3805963 | 11..492 | 99 | | Minus |