Clone FMO11679 Report

Search the DGRC for FMO11679

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:79
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14331-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11679.5prime Sequence

927 bp (927 high quality bases) assembled on 2012-05-29

> FMO11679.5prime
CAGTCGACATGAAGGAAGGAAAATTGGAGCAGACGCGCAGTAAACTAGAG
CAAATACTTAATATCCATAAGCCAAATTATCTGGATAGTACTTTTCAAGA
GCTTCTTCCCAATTTTTGCAAAGGATTTCTATTCAGCGAAAAATGGGTTA
AGTGGATCAAAATTGTTTTGCTCGGAACTCTTATTTTATTGGGAGTTAAA
TACTACTATGAAGAAATGCAGGGAAAGAATTGCGCTCTATATCTGCCTCG
CAACTTGCGTTACGCTTTCCGACCGCCTGAAAATTGTAATTTCTGTGCAA
ATATTAAAAATGTGCCGCGACTTAAAAATATTAGCCCCCAGGAGTTTGAG
AAAAAATTCGCATACAGTGCAGCGCCAGTTATCATTAGTGATGCCACTAA
AAATTGGACAGCAGTTTCGTTATTTAACTACTGGTATTTTCGCGATGTTT
ATACCAAGGCCAAGCAAAAGCAGCACATAAGGGAATGCCAGTTCCTGCCG
TATAAAACCGGATTTTTGGATATCTATGACGCTTTGGATATGCCCGAGGA
TCGGGTGGAGCTAAAACCAGGCGAACAGCCCTGGTACTTCGGCTGGAGCA
ACTGCCATGCGGAAACCGCAGAGGAATTCCGCAGGCACTATGGTAGACCA
TATTTTCTGCCCGAAGGCTCGGAAAACAATGCTGTTGATTGGTTTTTCAT
TGGCTTATCCGGCTTGGGTGCCCAAATGCATATTGACAACGTGAGACTGC
CATCGTGGCAGGCTCAGCTGGCGGGCAGCAAGCGATGGCTACTGGTTCCA
CCTCCCGAGTGCTACCTGCAGTGCCGGAGATTCGACGTGGTGGTCAACAG
GGCGACATAATTTGTGTTGGAACGACAAGTGGTAACCACCAGACCTTTGT
GCGTCCGGAAGCATCAGCCTGACTATG

FMO11679.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14331-RC 1143 CG14331-RC 25..941 9..923 4400 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17439836..17440148 731..419 1565 100 Minus
3R 32079331 3R 17440486..17440704 227..9 1095 100 Minus
3R 32079331 3R 17440208..17440401 419..226 970 100 Minus
3R 32079331 3R 17439296..17439430 860..727 610 98.5 Minus
Blast to na_te.dros performed on 2014-11-28 02:59:21 has no hits.

FMO11679.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:14 Download gff for FMO11679.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14331-RC 18..944 1..927 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:54 Download gff for FMO11679.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14331-RC 18..944 1..927 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:43 Download gff for FMO11679.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14331-RC 18..944 1..927 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:43 Download gff for FMO11679.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 17439296..17439425 732..860 99 <- Minus
3R 17439836..17440147 420..731 100 <- Minus
3R 17440208..17440399 228..419 100 <- Minus
3R 17440486..17440708 1..227 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:54 Download gff for FMO11679.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13265558..13265869 420..731 100 <- Minus
arm_3R 13265930..13266121 228..419 100 <- Minus
arm_3R 13266208..13266430 1..227 98   Minus
arm_3R 13265018..13265147 732..860 99 <- Minus