FMO11680.5prime Sequence
815 bp (815 high quality bases) assembled on 2012-05-29
> FMO11680.5prime
CAGTCGACATGGCAATTAAGTTGGTAGCCCTTTTGACCATCGGACTGGCA
ATCTTTGCCGCGTGCGAAGCCCGCCATGTGAGCGGACACCATCGCAGGCA
GCATTTTGAGCAGCGTGCCCTCATAGCGAAGCCCCACAGTGGTCCCCAGG
GACGAGTCTTCCCCGGTGCCGTGGCCATTAAGAAGCTGGTTCTGCTTAAG
TTCAAGAAGATCGTGCCCATCTCTCTGATCCTGCTGAAGTCAAGCAACGA
GAACGAGGCCGAGCTGGTGCCCGTCTATCCCACCGATCAGATTCCCGAGA
ACGTTCAGTTCATCCCGACACCCAATGGAATTTCCGGTCACAAGGATGTC
CAGGCCATCGCCATTCCTGCCGAGCTGCACGACCAGCTGCAGATCAACGG
TCTGTCCAACCTGGAGAACATCGAGGCTCTGCTGCAGAGCTTTTCGATCT
CGGCTGCCGACAATGAAGGCGAGGCCCCCGTGGGCAACAGCATTGCCGTA
GCCCAGCCCGAGGATGTGGTACTGGAGCAGCCAGAGAACGATGAGGATCA
GCTGTTAGACGGAGCCGCTCCAGTCGCCGCTCCTGTAGCCGTCGCTCCCG
CCGCCCTGCGCCGCCTATCCGCCGACGAGCTGCTCCGCTCCGGCGTGCGC
AACTCTGCCCAGCAGCAGCAGACCAGCGTGGAGGAGATACCCCTGCTTCT
GTACTCCGCCAACGAGGGCTCCTCCTCCGCCGGAACTCGGGACGTCGCTT
TGTGGGCGCCGCTCCGGCACAGCGCCGTCGCCAGCAGTTCTATCAACGCA
AGCTTTCTAGACCAT
FMO11680.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14424-RA | 1046 | CG14424-RA | 90..874 | 9..792 | 3840 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2926056..2926781 | 792..68 | 3520 | 99.3 | Minus |
| X | 23542271 | X | 2927109..2927169 | 69..9 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:59:25 has no hits.
FMO11680.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:15 Download gff for
FMO11680.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14424-RA | 1..792 | 9..798 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:57 Download gff for
FMO11680.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14424-RA | 83..878 | 1..797 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:44 Download gff for
FMO11680.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14424-RA | 83..878 | 1..797 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:44 Download gff for
FMO11680.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2926052..2926779 | 70..797 | 99 | <- | Minus |
| X | 2927109..2927176 | 1..69 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:57 Download gff for
FMO11680.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2820085..2820812 | 70..797 | 99 | <- | Minus |
| arm_X | 2821142..2821209 | 1..69 | 94 | | Minus |
