Clone FMO11681 Report

Search the DGRC for FMO11681

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:81
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG30285-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11681.5prime Sequence

362 bp (362 high quality bases) assembled on 2012-05-29

> FMO11681.5prime
CAGTCGACATGAGATCGTGTACTTTACTTGTTTTCATAGTGAGCACGCTG
TTGTTTGCCGTGACAAATGCGCAGCAGAATTATGATGGAAGAAATGGTCC
CCATGAGTTCGGCACACCTGGAAACGGCATTTACATACGGGGTCAGAACG
AAGGACCCTACACAGTGCCCGAAATGGGAGGAACGTTCCAAAACTCACCC
TCAAGTGGGCAGCATTCCTACACCGATGAGCACGGAAATACTTACACCCA
TTCCTCAACGGCAACTGTCACAAGTTTGGCCTATTCAACCTTCGGTTTCA
GCATGGGCGGCGTTCTCATTTTTCTAATTAGTTTAATAACCATTGCAAGC
TTTCTAGACCAT

FMO11681.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:56:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG30285-RA 575 CG30285-RA 35..371 8..344 1685 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:56:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21688107..21688391 344..60 1425 100 Minus
2R 25286936 2R 21688459..21688511 60..8 265 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:56:42 has no hits.

FMO11681.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:44 Download gff for FMO11681.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30285-RA 5..352 1..352 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:15 Download gff for FMO11681.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30285-RA 29..376 1..352 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:43:20 Download gff for FMO11681.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30285-RA 29..376 1..352 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:20 Download gff for FMO11681.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21688102..21688390 61..352 98 <- Minus
2R 21688459..21688514 1..60 93   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:15 Download gff for FMO11681.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17575607..17575895 61..352 98 <- Minus
arm_2R 17575964..17576019 1..60 93   Minus