Clone FMO11684 Report

Search the DGRC for FMO11684

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:84
Vector:pMK33-CFH-BD
Associated Gene/TranscriptOsi8-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11684.5prime Sequence

825 bp (-60 high quality bases) assembled on 2012-05-21

> FMO11684.5prime
GGCATGCGTCTGCTCTGATGATCGTCTTCTGTTGGCTCTCCAGTGCCCGC
AGTGCCAGCTACCAGCATCAGAACCCGAACAGTCTGAGCTCGGCCCCCAG
GCCCCAAGTCCAAAACAGTAACCCCGGAATGGGGTCTACGGGCTTGTGGA
AGGACATGTCAATGGTCTACCGCATATACCAGCAGTGCTCGGGCGATAAC
ATGTCCGTTTGCCTAAAGGTCAAACTGCTAACCGGCTTGGAGAAGGCCTT
TCGATCGGCAAAGTCTCTCTCGCTCATGGAGGGCATTCAGTTCGTCAGTT
CTGGTGGAGAAAGTGAGGAGACCAAAAGAGCGCCCATTAGCGAAAAGGAT
ATTGAAGCCGTCTTGCCGAGAAGTGTGGACGCCAAGGAGCAGGTCCTAAA
CAACATGATCCTGAAGCGGGTGGGCAACTTCCTACAGGATCACACGCTAC
AGGTGAAATTCGATAACGAGGCAAATTCGGTGGAGGGTCGCAAGAAAAAG
GAGAAGAAGGGCAACGGCGCAATGATCATGATTCCCCTTCTGCTTGGCGG
CACCATTGTGCCCCTGGCCTACGGAGCCTTGGCCATGTTGGCGGGAAAGG
CGCTGATTGTGTCCAAGCTGGCCCCTGGTGCTGGCCTCGATCATCGGAAT
CAAGAAGCTGCTGAGTGGAGGCGGCGGCGGGAAGGAGTCCTCCCACGAGG
TGGTCGTCTCCTCAGGAGGACATTCCGGCTGGGGTCGGGAGCTGGACACT
GCCTACAGCGGCTGGAAGCCTGCGGCCCAAGAGTCGGCGGGCAGCGCCAA
GAGCCTGCCAAGCTTTCTAGACCAT

FMO11684.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:52:46
Subject Length Description Subject Range Query Range Score Percent Strand
Osi8-RA 1135 CG15591-RA 117..922 1..807 3920 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:52:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6255291..6255746 1..456 2250 99.6 Plus
3R 32079331 3R 6256033..6256389 450..807 1680 98.6 Plus
Blast to na_te.dros performed on 2014-11-28 02:52:45 has no hits.

FMO11684.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-21 12:22:11 Download gff for FMO11684.5prime
Subject Subject Range Query Range Percent Splice Strand
Osi8-RA 17..825 1..810 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:30:43 Download gff for FMO11684.5prime
Subject Subject Range Query Range Percent Splice Strand
Osi8-RA 117..928 1..814 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:26 Download gff for FMO11684.5prime
Subject Subject Range Query Range Percent Splice Strand
Osi8-RA 117..928 1..814 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:26 Download gff for FMO11684.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 6255291..6255742 1..452 99 -> Plus
3R 6256036..6256395 453..814 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:30:43 Download gff for FMO11684.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2081758..2082117 453..814 97   Plus
arm_3R 2081013..2081464 1..452 99 -> Plus