FMO11685.5prime Sequence
987 bp (973 high quality bases) assembled on 2012-05-29
> FMO11685.5prime
CAGTCGACATGTTTTACCCAAAAACACCATTTTTGGTGAACCCGTTGCTG
GAAGCCGATATCCTTAAAGTGAATTCTGCTGCACTTGCTCCGCTGTTGGA
ATGGCTGTGCCTTACTCCCAAAGTCACCACTTACAGGGTGAACACTCTTA
GGTGTTCCGTTGACGACTTTCGGAAAAAGTTAGAAGAAAAACTCGCCATT
CGCTACGGTGTAAAATCTCCAAGGATTTACTGCTTGCCAAACCTACCCGA
GATGTTGTGCATTGATCCGCTGGACTCACAGCTCACCAAAGCTGTGGCCG
ACTCCGAGCTCAAGGAGGTAGTGGTTGACACTAACTGCGGAGCTGCACTA
CTGCGAGGCGCCCACATATACGCCCCCGGTGTTTTAGCTATGGAGTCAAA
CACTGAGCGGGAGGAACTCGTCAATGTCTACGCAGATCTGGATGGAAAAT
GCAAGCGCGGGACGGTCAAGCGGTACGAAAGCCCAAATAAGGTTTTCCTG
GGTACAGGCAAGGTGTTAATGCAGCGGTATCAGCTGTTCAACAACGCGGA
GAAGCCCGCCTCTGGAGTGGCCGTGGAAATGCAGTCCAACGTCAGCGGAG
TGCCCACGCTGGGGGATCTAAGCAGCGAAGACGGCCTGTTGCAAAACCTG
CCTTCTATTGTTTGCGTCCGTGTCCTGGATCCGCAGCCCGGCGAGCGCAT
ACTGGACATGTGTGCCGCTCCGGGTAACAAAACAAGCCACATAGCCGAGT
TGATGGGCGATCGGGGATCTGTGGTGGCCCTAGACAATTCGGCCAGTCGC
GTCCGCAGCATGCTGCCCAATTGGGACACTACAAAAGCATAACGGCGCAT
GTTTTTAACCTCCACCGAGGCATGGGCAGCGGAGGCTCCATCTGCACCCG
TGGGAGAATTCACTGGGCCTCGTTCCATGTGAAAGCTTGACCGATCTTGC
TCGATGCACTTGCGTGGGCTGGGCAACCGGCCACAGA
FMO11685.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11109-RB | 1415 | CG11109-RB | 82..1065 | 9..986 | 4665 | 98.8 | Plus |
| CG11109-RA | 1445 | CG11109-RA | 178..1095 | 75..986 | 4335 | 98.7 | Plus |
| CG11109-RA | 1445 | CG11109-RA | 24..89 | 9..74 | 330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22872435..22873352 | 75..986 | 4160 | 98.4 | Plus |
| 3L | 28110227 | 3L | 22872281..22872346 | 9..74 | 330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:59:36 has no hits.
FMO11685.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:17 Download gff for
FMO11685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-RB | 70..1059 | 3..986 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:03 Download gff for
FMO11685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-RB | 76..1065 | 3..986 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:50 Download gff for
FMO11685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11109-RB | 76..1065 | 3..986 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:50 Download gff for
FMO11685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22872275..22872346 | 3..74 | 95 | -> | Plus |
| 3L | 22872435..22873352 | 75..986 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:03 Download gff for
FMO11685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22865375..22865446 | 3..74 | 95 | -> | Plus |
| arm_3L | 22865535..22866452 | 75..986 | 98 | | Plus |
