Clone FMO11690 Report

Search the DGRC for FMO11690

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:90
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13760-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11690.5prime Sequence

745 bp (745 high quality bases) assembled on 2012-05-29

> FMO11690.5prime
CAGTCGACATGAACGGACTGCCGCCGAGCAAGCACTACAACCTGACGCAC
TACCAGCAGCGCTACAACTGGGACTGCGGTCTGTCCTGCATCATTATGAT
CCTGTCGGCGCAGCAAAGGGAACAGCTTCTTGGGAACTTTGATGCCGTGT
GCGGCGAGGAGGGATTTGGCTCGAGCACCTGGACCATCGACCTGTGCTAT
CTGCTGATGCGCTACCAGGTGCGCCACGAGTACTTCACCCAAACGCTCGG
GATCGATCCCAACTACGCGCAGCACACGTACTACTCCAAGATCATCGACA
AGGACGAACGGCGCGTGACGCGCAAGTTCAAGGACGCCCGGGCCCATGGA
CTGCGCGTTGAACAGCGCACCGTGGACATGGAGGTCATTCTGCGGCATTT
GGCCCGCCACGGACCCGTCATCCTGCTGACCAACGCCTCGCTGCTCACGT
GCGAGGTGTGCAAGCGCAATGTCCTAGAGAAGTTCGGCTGTTTTCATATA
CCCTGCATTGCTCAAAATACACGCCTCCATGGACCCAAAAGGTATGCCGG
ACACTATGTGGTGCTCTGCGGATATGACATGGCCGCCCAGAAGCTCTTCT
ACCACAATCCCGAGGTCCACGATGGCCACATTTGTCGCTGCCTCATCGAG
TCCATGGACACGGCCCGACGCGCCTACGGCACGGACGAGGACATCATTTT
CATATACGAGAAGAGGAAACTAGGGAGGCAAGCTTTCTAGACCAT

FMO11690.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG13760-RC 1524 CG13760-RC 255..974 9..727 3575 99.9 Plus
CG13760-RD 1389 CG13760-RD 174..652 9..487 2395 100 Plus
CG13760-RD 1389 CG13760-RD 652..839 541..727 915 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2584667..2584939 487..215 1365 100 Minus
X 23542271 X 2584995..2585207 221..9 1065 100 Minus
X 23542271 X 2584463..2584603 627..487 705 100 Minus
X 23542271 X 2584295..2584395 727..628 455 99 Minus
Blast to na_te.dros performed on 2014-11-28 02:59:45 has no hits.

FMO11690.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:19 Download gff for FMO11690.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13760-RC 251..974 1..727 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:09 Download gff for FMO11690.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13760-RC 251..974 1..727 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:53 Download gff for FMO11690.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13760-RC 251..974 1..727 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:53 Download gff for FMO11690.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2584295..2584395 628..727 99 <- Minus
X 2584463..2584602 488..627 100 <- Minus
X 2584667..2584935 219..487 100 <- Minus
X 2584998..2585211 1..218 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:09 Download gff for FMO11690.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2478328..2478428 628..727 99 <- Minus
arm_X 2478496..2478635 488..627 100 <- Minus
arm_X 2478700..2478968 219..487 100 <- Minus
arm_X 2479031..2479244 1..218 98   Minus