FMO11691.5prime Sequence
759 bp (758 high quality bases) assembled on 2012-05-29
> FMO11691.5prime
CAGTCGACATGGCGGACATTTACCAGGATGCCAGCACCACGCTGCGCTCC
GTGTTTCCCAACTCGCGGCTGGACTCGCTGGCCGGAGTGGATCGCCGGAT
GGAGAGTCAGCTGCCAGGACCACCGGATGCGGATGCAGTCACCACCGCCT
CGAGCATTGGCTATAATCCGCTCAACGACGACGACTGGTGGGCCAATGCC
ATCGAAGTGGACACCTTCGACTCACCGCTGGCCTTCGATGCTAGCGAAAA
TGGTCTGTGGAACGGACACTTTGTGCCGCCGCCACCTCGCCCGCCCTTCC
TGGATGAAAGCGTCGCCGCCGACGGCCTGACCACCTGTGATCTGTGCACG
TGGGCATGGCAGCGGAATGCCTACTCCCTGGATGGTTCCATAGAAACCGC
CGGCGAACTTGGATGGGCATTCACCCTAATCATAGTTTCAATCATATCGG
CTCTAATAGGTGCTATTGTAATGGTCATAGTTCTAAGATGTAGAAGAATT
AAATCAGCGAATGCCAATGGTGGCCGCCCGCAGCCTTGGTGGTGTCGCAA
TAACCGAAACGGTGGCCAAAATCGATCGCCCATCTCGATCAAGCACTCGG
CGGACAGCATCCGGCGGCCCACGAGCAACTCCGGCGTTTGGACCTGGCTG
GGCGGCAGTCGTCGCTCCTCCGCCCGGTCCCGACCAGATCGGTCCGCCGT
CGACGTCGCCGGCGGAGAACCACTATACCCCACATGGACGATGCCTACGT
CCGGTGGGC
FMO11691.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42747-RC | 2857 | CG42747-RC | 735..1484 | 9..759 | 3685 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6461666..6462050 | 9..393 | 1925 | 100 | Plus |
| 3L | 28110227 | 3L | 6484230..6484469 | 519..759 | 1060 | 98.8 | Plus |
| 3L | 28110227 | 3L | 6476541..6476645 | 392..496 | 525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:59:48 has no hits.
FMO11691.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:19 Download gff for
FMO11691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42747-RC | 726..1482 | 3..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:10 Download gff for
FMO11691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42747-RC | 728..1484 | 3..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:55 Download gff for
FMO11691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42747-RC | 728..1484 | 3..759 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:55 Download gff for
FMO11691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6461659..6462050 | 3..393 | 99 | -> | Plus |
| 3L | 6476543..6476645 | 394..496 | 100 | -> | Plus |
| 3L | 6480295..6480317 | 497..519 | 100 | -> | Plus |
| 3L | 6484231..6484469 | 520..759 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:10 Download gff for
FMO11691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6454759..6455150 | 3..393 | 99 | -> | Plus |
| arm_3L | 6469643..6469745 | 394..496 | 100 | -> | Plus |
| arm_3L | 6473395..6473417 | 497..519 | 100 | -> | Plus |
| arm_3L | 6477331..6477569 | 520..759 | 98 | | Plus |
