Clone FMO11692 Report

Search the DGRC for FMO11692

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:92
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43105-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11692.5prime Sequence

257 bp (257 high quality bases) assembled on 2012-05-29

> FMO11692.5prime
CAGTCGACATGTGTCATCCAAGTCTACTGATGTGGCGTATTTATTCCCTT
AAGCCCACATCCAAATTCTTGGAGTTCAGGATCAAGAGGAGATACGGCCT
GACTCGTTGGCATCCGCAGTTTGATTTGGAGAGCTGTCCCCTTTGCCCCA
GTCGCCCAATGTCGAGAAATTCTCCTCAGACAAGGCTATTCTATCTAACG
CTTGTAGGCCAGGTTGAAGGCGAACAAACAAGTAAGTTCGCAAGCTTTCT
AGACCAT

FMO11692.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:56:50
Subject Length Description Subject Range Query Range Score Percent Strand
dup-RB 2764 CG8171-RB 1698..1769 131..202 225 87.5 Plus
dup-RA 3138 CG8171-RA 2072..2143 131..202 225 87.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:56:48
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15374998..15375228 239..9 1155 100 Minus
2R 25286936 2R 15374065..15374231 204..40 635 93.4 Minus
2R 25286936 2R 15375920..15375973 62..9 255 98.1 Minus
2R 25286936 2R 15377614..15377685 202..131 225 87.5 Minus
Blast to na_te.dros performed on 2014-11-28 02:56:49 has no hits.

FMO11692.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:46 Download gff for FMO11692.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43105-RA 413..652 1..246 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 21:33:19 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 03:43:23 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:43:23 Download gff for FMO11692.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 15374993..15375232 1..246 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:19 Download gff for FMO11692.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11262498..11262737 1..246 97   Minus