FMO11693.5prime Sequence
705 bp (690 high quality bases) assembled on 2012-05-29
> FMO11693.5prime
TGCAATAGGAAATATGTCCGTCTGTGGCCAGTGCTCATACTGTTCAATGT
GGCACTCCTGCTGGTTTGGAGGAACCTGCAGCAGGCCCAGAAACTGGCCG
CATCTTCTAATACTGGTGGGCAAAAGTCGGTAGGACTTTTGCTGTCCAAC
GAGTCGAATCCCTCACGTTTTTCTGCAAACTTCCATCTCGCCAATGATCA
GCATCCGAAAATAATCCGGCGAGAGGACTCCGCTCGCACCAAGGAATTGC
GATCATTGCTCAAGTGCCGCGACCGATCGCTCCGTTTCGAGAGGCTTCAG
CACGGAGAGTTCTGGCTGCTTCAGAATCTTGTCATGGGACGAAAGAGTCT
GGAAGTCGGCTGTGCCGAGTCCGTGACGTATACCACCAACGGGGACTTTA
CGTTCTTCGATAATCTGGAAATGGTGGTATCACGTTGGCGTGCTCCAGTT
AGTTTTGCCATCCACACTCCAGGTTATGATCTTAACACCACACTGGATGC
CATTCGGTATGTGCGAAACTGTTTGCCGGATAGCGATAGCATCAAGGACT
GGGTCTCCTTTCACGTGTACTTCCCAAATCAGCACATGCCGGAATACTTG
CCATATGACGAGGCCGAGGTACTAATGTATCCGCACATGTGCACCCTGAC
CAATGGATCGATGGTATCGCCGCTCTACACGCAAATCTCAACCTCGGATA
CCTAC
FMO11693.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11149-RE | 1999 | CG11149-RE | 310..1014 | 1..705 | 3405 | 98.9 | Plus |
| CG11149-RD | 1898 | CG11149-RD | 209..913 | 1..705 | 3405 | 98.9 | Plus |
| CG11149-RC | 1941 | CG11149-RC | 252..956 | 1..705 | 3405 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5719511..5719944 | 434..1 | 2155 | 99.8 | Minus |
| 2L | 23513712 | 2L | 5719160..5719431 | 705..434 | 1255 | 97.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:59:51 has no hits.
FMO11693.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:20 Download gff for
FMO11693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11149-RC | 252..956 | 1..705 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:13 Download gff for
FMO11693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11149-RC | 252..956 | 1..705 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:57 Download gff for
FMO11693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11149-RC | 252..956 | 1..705 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:57 Download gff for
FMO11693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5719160..5719430 | 435..705 | 97 | <- | Minus |
| 2L | 5719511..5719944 | 1..434 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:13 Download gff for
FMO11693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5719160..5719430 | 435..705 | 97 | <- | Minus |
| arm_2L | 5719511..5719944 | 1..434 | 99 | | Minus |
