Clone FMO11695 Report

Search the DGRC for FMO11695

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:116
Well:95
Vector:pMK33-CFH-BD
Associated Gene/Transcriptmetl-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11695.5prime Sequence

930 bp (930 high quality bases) assembled on 2012-05-29

> FMO11695.5prime
CAGTCGACATGAGTGACAACCCCGCCGCGGAGAACGAAAAGCGACCGCAG
TTCGGAACCCGCCTGCTCACGGATGCTGACGACGTCTTCAAGCACAATGC
TTGGGACCACGTGCAATGGGATGAAGAGCAGGAACTGGCCGCGAAGGCGG
CTGTAGCCAAGAATTCGACCTCAAAGATGGAAGCGGAGCAGAAGGAGCGA
TTTCAGACAGACGCCCCCAAGTTTTGGGATTCCTTCTACGGCATTCACGA
CAACCGCTTCTTCAAGGATCGCCACTGGCTGTTTACGGAGTTCCCCGAAC
TAGCTCCTCTGGCGGCGGATTCGGCGGTACTGCAACCACGTAGCATTTTC
GAACTGGGCTGTGGAGTAGGAAACACAATTTTACCCCTTCTACAGTACAG
CTCTGAACCGCAGCTCAAGGTTTTCGGATGTGACTTCTCCGCCCGGGCCA
TTGAAATCCTGCGAAGCCAACGGCAGTTCGACGAGAAGCGCTGCGAGGTG
TTTGTCATGGATGCCACGCTGGATCATTGGCAGGTGCCCTTCGAGGAAAA
CTCACAGGACATTATTGTGATGATTTTTGTGCTGTCCGCAATTGAGCCAA
AGAAAATGCAGCGGGTATTGGACAATTGCTATCGCTACCTGCGTCCCGGT
GGCTTGCTCCTCTTCCGCGACTACGGACGATACGACCTGGCACAGCTGCG
CTTCAAGAGCGGCAAGTGTATGGAGGACAACTTCTACGTGCGAGGCGACG
GCACCATGGTGTACTTCTTCACGGAGGAAGAACTGCGGGGTATGATGACT
CAAGCGGGGCTGCAGGAGGAGCAGCTCATTGTGGACGAAGACTGCAAGTT
AATCGCTGTCGCGGCTTGAAATTGTACCGCGTGTGATTCAGACAAAGTTC
AGAAACCGCTTGCAAGCTTTTCTAGACCAT

FMO11695.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:30
Subject Length Description Subject Range Query Range Score Percent Strand
metl-RA 1107 CG13929-RA 96..1005 5..911 4445 99.5 Plus
metl-RB 1240 CG13929-RB 326..1138 102..911 3975 99.5 Plus
metl-RB 1240 CG13929-RB 96..195 5..104 485 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:28
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1638054..1638855 902..103 3895 99.6 Minus
3L 28110227 3L 1639041..1639140 104..5 485 99 Minus
Blast to na_te.dros performed on 2014-11-28 02:59:29 has no hits.

FMO11695.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:15 Download gff for FMO11695.5prime
Subject Subject Range Query Range Percent Splice Strand
metl-RA 90..1007 1..915 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:59 Download gff for FMO11695.5prime
Subject Subject Range Query Range Percent Splice Strand
metl-RA 91..1008 1..915 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:47 Download gff for FMO11695.5prime
Subject Subject Range Query Range Percent Splice Strand
metl-RA 91..1008 1..915 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:47 Download gff for FMO11695.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 1638040..1638854 104..915 99 <- Minus
3L 1639042..1639145 1..103 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:59 Download gff for FMO11695.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1638040..1638854 104..915 99 <- Minus
arm_3L 1639042..1639145 1..103 97   Minus