FMO11696.5prime Sequence
557 bp (557 high quality bases) assembled on 2012-05-29
> FMO11696.5prime
CAGTCGACATGCGTGCCACAGTGTTTTTTCTCGGCCTCTTGGCTATCAGT
TACTGGGAGGAGTCCCATGGTCATGTTGTGCCCGTGGGTCTTCCTGCAGT
CGGAACCTATCTGCTGTCTCCACCCGTTGTCTTGCTAGTCCAGCCACCTC
CTCCTCCGCCGGAAGACGATGGCTCCTACAAGCCGCCTTCGCCCCCCGAA
GATGGCTCGTGGCAGCCACAGCCTGGTCTGGAGGGAGAGTACTCGGACCC
GGAACTAAGCCAGAGTGGCAGTGGAAGCATTACAGCCAGTGACGCAGGAG
CTGCTGCCCTGAGTTTGGTTGCCTCACAATCTGTAGACGCCCAAGATGCC
CCTGCTCCGGCGGAGGCCGGTGGAGCAGGAGGTGCCGGACAAGCGGGACA
GGCTGGAGCACTTCTAGGCGGAGCGGGAGGAGCAGGTGGAGCTGGTGGTG
GAGGCAGCGCTGGAGGCGGTGGCGGCGGAGGAGGCGGCGGCGGTGGCGGG
ACGGCCACATCCGGCCAGAGCGGAGACAGTTGCCAGCCCCGGAGCGCCGA
GTCCAGC
FMO11696.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4000-RA | 999 | CG4000-RA | 70..617 | 9..557 | 2690 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20676673..20677206 | 557..23 | 2595 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:59:32 has no hits.
FMO11696.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:16 Download gff for
FMO11696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4000-RA | 71..618 | 9..557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:01 Download gff for
FMO11696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4000-RA | 71..618 | 9..557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:44:48 Download gff for
FMO11696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4000-RA | 70..617 | 9..557 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:44:48 Download gff for
FMO11696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20676673..20677205 | 24..557 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:01 Download gff for
FMO11696.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16502395..16502927 | 24..557 | 99 | <- | Minus |