FMO11703.5prime Sequence
944 bp (-60 high quality bases) assembled on 2012-05-16
> FMO11703.5prime
CTACCTTAGGCTGCCACCGCATCGGCTGGCTTCATTGGCGGATCCGGCGG
TGGTGGCGGAGGTGGCCACCAGGAGGTGAAGACCATCCAGGTGATCCACC
AGGAGGGTGGCGGCTACTCCGGCGGCGGTGGTCATGGCGGTTACTCTGGT
GGCCATGGAGGCTACTCTGGCGGCGGCCATCAGGAGATTAAGACCATCAA
GGTCATTCAGCAGGAAGGTGGCGGCTATTCCGGCGGTCATGGCGGTTACT
CCGGTGGTCACGGTGGCTACTCTGGCGGTGGACACCAGGAGGTGAAGACC
GTTAAGGTCATCCATGATGAGGGACATGCCCTGGGCGGCGGCGGTTATGC
CGGAGGCCTTGCCGGCCATGGACACGGACATGGTGGCCATCAGGAGGTAA
AATTGGTCATGGTCATCCATGAGGAGGGCGGTCATGGCCACGGACACGGT
GGTGGCTACTCCCACGGTGGTGGCTACTCCGGCGGTCATCAGGAGGTTAT
GACTGTGAAGGTCATCCATCAGGAGGTTGGCGGTCATGGCGGTTACTCTG
GCGGACATGGTGGCTACTCTGGCGGCGGTCACCAGGAGGTCAAGACCGTT
AAGGTCATCCACGAGGAAGGACACGCTTTGGGCTGCGGCGGCGGCTATGC
CGGTGGCTACTCCGGCCATGGACATGGACATGGCGGCCACGATGAAGTGA
ATGTGGTCAAGGTGATCCATGAGAGGGCGGTCACAGCCACGATCACGGTC
ATTCGCACGGCGGATTCAAAGAGGTCAAGACCATCAAGGTCATTCACGAG
GACGGTGGCCATGCCCACGGCCACGGACCCGCCCCCATCATCAGCAACGA
ATACCTGCCGCCCAGCAATGAGTATCTGCCCCCGTATCCGCTCCCACCCG
GATATCTGCCCCCATCCTCAGCTGAAGCAAGCTTTCTAGACCAT
FMO11703.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:46:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15731-RA | 1180 | CG15731-RA | 99..1026 | 1..924 | 4375 | 98.5 | Plus |
| CG15731-RA | 1180 | CG15731-RA | 626..847 | 232..450 | 560 | 83.8 | Plus |
| CG15731-RA | 1180 | CG15731-RA | 329..547 | 529..749 | 550 | 83.8 | Plus |
| CG15731-RA | 1180 | CG15731-RA | 161..303 | 175..311 | 315 | 81.8 | Plus |
| CG15731-RA | 1180 | CG15731-RA | 272..408 | 64..206 | 315 | 81.8 | Plus |
| CG15731-RA | 1180 | CG15731-RA | 629..717 | 130..218 | 265 | 86.5 | Plus |
| CG15731-RA | 1180 | CG15731-RA | 227..315 | 532..620 | 265 | 86.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12456569..12457483 | 919..9 | 4275 | 98.6 | Minus |
| X | 23542271 | X | 12456742..12456963 | 450..232 | 535 | 83.8 | Minus |
| X | 23542271 | X | 12457042..12457260 | 749..529 | 500 | 83.8 | Minus |
| X | 23542271 | X | 12457286..12457428 | 311..175 | 290 | 81.8 | Minus |
| X | 23542271 | X | 12457181..12457317 | 206..64 | 290 | 81.8 | Minus |
| X | 23542271 | X | 12456872..12456960 | 218..130 | 265 | 86.5 | Minus |
| X | 23542271 | X | 12457274..12457362 | 620..532 | 265 | 86.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:46:28 has no hits.
FMO11703.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-16 10:41:01 Download gff for
FMO11703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15731-RA | 96..1027 | 1..931 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:06 Download gff for
FMO11703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15731-RA | 99..1030 | 1..931 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:26 Download gff for
FMO11703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15731-RA | 99..1030 | 1..931 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:26 Download gff for
FMO11703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12456559..12457490 | 1..931 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:06 Download gff for
FMO11703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12350592..12351523 | 1..931 | 98 | | Minus |
