FMO11706.5prime Sequence
717 bp (717 high quality bases) assembled on 2012-05-29
> FMO11706.5prime
CAGTCGACATGATTGGAAAAGCATTGCTTCTGCTGGGCTGTGTGCTGCTC
TTCGCTTTTGGTGAAGCCAACCAGGAACTGGAGACTCTGCTGCAGAAGCA
ACAGGTGGACTTGCAGTTGTCTGGCGAGGAAGTGGCTGCTTTGCGTCCAC
TGTACCTAGAGTTTCAGGCGCAGTACAACTATCTGTACAGCCTGAGGCTC
CAGAGCGGCGATGGGAGTGATCAGAATCCCGCGGAGGAGCCTGAACTGGA
TAGCAACTACCTACGGGCATTTGAAGACTTTCGCGAAAAGTTCTCCATTT
ACTTGGATGAGAAACCTCGAGTGGTGTATGACACAAAATTGCCCACTGTC
GACGAGATCATGGGAAAGCCCAGTCCCGACTTCACACCAAATCAGAGGGC
GGAATTCGAGGATCTCAGGGAGATTATTCAGGATGTTATTGACTAGGCAC
AGTTCGGCATTGACGACTTGGTGGAGAGGGCCATCCAACTGGAGACGAAT
CTGCTGAAGCTGAACAAACCAAAGATCGTGACCGCAGCCATTGCCGGATT
GGGATACATGTGGAACTACTGGGGCCGCGGAAGTCAGGCCGCCTATTGCA
GTTACTCGCTGGTCCCAGAGTTCCAGATAGGTCTGCAGGCCATTAACGAT
GGCGTTGATTGCTACTCCCGCACCATGGCCTTGGTAATGCGCATTCAAAA
TGAAACAGTGGCCGCTG
FMO11706.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31463-RA | 1275 | CG31463-RA | 32..740 | 9..717 | 3515 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8292366..8293074 | 9..717 | 3515 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-28 03:00:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 897..932 | 490..525 | 108 | 77.8 | Plus |
FMO11706.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:23 Download gff for
FMO11706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31463-RA | 8..724 | 1..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:22 Download gff for
FMO11706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31463-RA | 24..740 | 1..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:45:05 Download gff for
FMO11706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31463-RA | 24..740 | 1..717 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:45:05 Download gff for
FMO11706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8292358..8293074 | 1..717 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:22 Download gff for
FMO11706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4118080..4118796 | 1..717 | 99 | | Plus |
