Clone FMO11708 Report

Search the DGRC for FMO11708

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:8
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14780-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11708.5prime Sequence

439 bp (436 high quality bases) assembled on 2012-05-29

> FMO11708.5prime
CAGTCGACATGACTCAGTTTGGCCTGCACGGCTGCAGCTACATTCTGTTC
TGGTTCCTTCTCGCCTGCGCGGCGGCGGACCTTCAGGAGAATCAGCAGTC
GCGCATCATCAATGGAAGCGTGGCCAAGGCGGACGAGACGCGCCACCTGG
TCTCCATCCGCCTTCTCCGCCACGACAACAACTTTGGAAGCGGCCACATC
TGCGGCGGGGCGCTAATCGCGCCCAGAAAGGTTCTGACCGCAGCGCACTG
CCTGTACAACAATCAGAGAAAGCGCTTTCGGCGGGCCAGCGAATTCGTAG
TGGTTCTGGGCACGCTGAACCGCTTCGAGCACCGCAATGGCACCATCGTG
TCCCAGGTGAGTTCCATGGCCTACATGCACACCTTCAGCCCGGACAGCAT
GCGCGACGACGTGGGCATCCTTTTTCTGCGCACCGGGCT

FMO11708.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG14780-RA 1082 CG14780-RA 45..475 9..439 2155 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1472566..1472816 9..259 1255 100 Plus
X 23542271 X 1472876..1473055 260..439 900 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:00:08 has no hits.

FMO11708.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:23 Download gff for FMO11708.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14780-RA 37..472 1..439 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:24 Download gff for FMO11708.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14780-RA 37..472 1..439 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:45:07 Download gff for FMO11708.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14780-RA 40..475 1..439 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:45:07 Download gff for FMO11708.5prime
Subject Subject Range Query Range Percent Splice Strand
X 1472561..1472816 1..259 98 -> Plus
X 1472876..1473055 260..439 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:24 Download gff for FMO11708.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1366594..1366849 1..259 98 -> Plus
arm_X 1366909..1367088 260..439 100   Plus