FMO11716.5prime Sequence
895 bp (892 high quality bases) assembled on 2012-05-29
> FMO11716.5prime
CAGTCGACATGTTGCGTACTCTGTCACGCGTTAGCGAATTGCCCATTATT
GTTAAGCAACTGCAAAAACGTTGCCATAACAACAACAACAACAACATCAT
CATCAGCGGATGTCGGATACTTAGCAACAACAACAACAACAGCAGCATCG
ATATCATCAGGAATGGGAGATATTCATCGTCGTTTTTCGGTTTATTCCAG
AATGCAGCCCAAGCAGGTGTTTCGAAAACCAACAATTATGCCACGGAGGC
CACCGTTCAAGTGAATCGGCCCTTCAAGCTGCACCGCCTGGACGAAGGAC
CCGCCACGGAAGTGAAGCTGACCAAGGATCAGGCCCTCAAGTACTACACA
CAGATGCAGACGATCCGTCGGTTGGAGACGGCCGCCGGTAATCTGTACAA
GGAGAAGATCATTCGCGGCTTCTGTCATCTGTATTCCGGCCAGGAGGCAT
GCGCCGTTGGCATGAAGGCGGCGATGCGGGATGTGGACAACATCATCTCG
GCGTACCGTGTCCACGGATGGACCTACCTGATGGGCGTCTCACCCAGCGG
CGTACTGGCTGAGCTCACCGGTGTCCAGGGTGGCTGTGCCCGCGGCAAGG
GTGGCTCCATGCACATGTACGCACCGAACTTCTACGGAGGCAATGGCATC
GTGGGTGCTCAAGTTCCTTTGGGTGCCGGCGTTGGCTTGGCCTGCAAGTA
CAAGGGCAATGGCGGCATGTGCCTGGCCCTCTACGGTGATGGTGCCGCCC
ATCAAGGACAGGTGTTCGAGGCTTACAACATGGCCCTACCTGTGGAAAAC
TGCCTGTGATCTTTTGTCTGCCAGAACAACAACTACGGAATGGGCCCCAA
TTCTTGAGCGGGCTTTCTTGCAACACTGATTACTATACCCCGCGG
FMO11716.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0334-RC | 2034 | CG7010-RC | 208..1084 | 9..890 | 4195 | 98.8 | Plus |
l(1)G0334-RB | 1992 | CG7010-RB | 363..1184 | 64..890 | 3905 | 98.5 | Plus |
l(1)G0334-RD | 1667 | CG7010-RD | 175..859 | 201..890 | 3235 | 98.4 | Plus |
l(1)G0334-RB | 1992 | CG7010-RB | 208..267 | 9..68 | 300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4703554..4704120 | 269..838 | 2670 | 99.1 | Plus |
X | 23542271 | X | 4702687..4702892 | 64..269 | 1015 | 99.5 | Plus |
X | 23542271 | X | 4702532..4702591 | 9..68 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:00:25 has no hits.
FMO11716.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:27 Download gff for
FMO11716.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0334-RC | 162..1050 | 1..895 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:37 Download gff for
FMO11716.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0334-RC | 200..1088 | 1..895 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:45:18 Download gff for
FMO11716.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0334-RC | 200..1088 | 1..895 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:45:18 Download gff for
FMO11716.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4702524..4702591 | 1..68 | 95 | -> | Plus |
X | 4702692..4702892 | 69..269 | 100 | -> | Plus |
X | 4703555..4704119 | 270..837 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:37 Download gff for
FMO11716.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4596557..4596624 | 1..68 | 95 | -> | Plus |
arm_X | 4596725..4596925 | 69..269 | 100 | -> | Plus |
arm_X | 4597588..4598152 | 270..837 | 99 | -> | Plus |