FMO11719.5prime Sequence
604 bp (604 high quality bases) assembled on 2012-05-29
> FMO11719.5prime
CAGTCGACATGTCGTTTGCGGAAAAGATAACGGGTCTGCTGGCACGGCCG
AATCAACAAGATCCAATTGGACCGGAGCAGCCGTGGTATCTCAAATATGG
AAGTCGATTGTTGGGCATTGTGGCCGCCTTCTTTGCCATTCTTTTCGGCC
TGTGGAATGTGTTCTCCATCATCACGCTCAGCGTATCCTGCCTGGTGGCT
GGCATCCTTCAAATGGTGGCAGGATTTGTGGTGATGCTCTTGGAGGCTCC
CTGCTGTTTCGTCTGCTTTGGGCAGGTGAACGAGATCGCGGAAAAGGTGG
AATCTAAGCCCTTGTACTTCCGTGCCGGGCTCTACATTGCCATGGCCATT
CCGCCCATTATTCTGTGCTTTGGACTGGCCAGCTTATTCGGCAGTGGGCT
GATCTTTGGCACTGGCGTGGTTTACGGCATGATGGCGTTTTTTCAAGAAA
GCTTCTCGAGAGGACATGGCCGCCGCTGCCACATCGCCCACACAGATGGC
CGGCAGTCAGGCGGGCGGTCAGATGCAGATGGGCGGCGATCAGCATATCA
CACTCATGGAAGACCCCGATGTCTGGCGCCCCACAGCAAGCTTTCTAGAC
CATT
FMO11719.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fwe-RB | 3020 | CG6151-RB | 134..710 | 8..585 | 2805 | 99.1 | Plus |
| fwe-RC | 2364 | CG6151-RC | 134..565 | 8..439 | 2145 | 99.8 | Plus |
| fwe-RA | 1342 | CG6151-RA | 134..565 | 8..439 | 2145 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:52:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15813419..15813626 | 340..133 | 1040 | 100 | Minus |
| 3L | 28110227 | 3L | 15812762..15812897 | 585..450 | 680 | 100 | Minus |
| 3L | 28110227 | 3L | 15815936..15816057 | 132..11 | 595 | 99.2 | Minus |
| 3L | 28110227 | 3L | 15813255..15813353 | 439..341 | 495 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:53:00 has no hits.
FMO11719.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:01 Download gff for
FMO11719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| flower-RB | 132..721 | 1..593 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:30:53 Download gff for
FMO11719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fwe-RB | 127..716 | 1..593 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:32 Download gff for
FMO11719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fwe-RB | 127..716 | 1..593 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:32 Download gff for
FMO11719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15812756..15812897 | 450..593 | 97 | <- | Minus |
| 3L | 15813246..15813353 | 341..449 | 96 | <- | Minus |
| 3L | 15813419..15813626 | 133..340 | 100 | <- | Minus |
| 3L | 15815936..15816059 | 8..132 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:30:53 Download gff for
FMO11719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15805856..15805997 | 450..593 | 97 | <- | Minus |
| arm_3L | 15806346..15806453 | 341..449 | 96 | <- | Minus |
| arm_3L | 15806519..15806726 | 133..340 | 100 | <- | Minus |
| arm_3L | 15809036..15809159 | 8..132 | 98 | | Minus |
