FMO11721.5prime Sequence
572 bp (-77 high quality bases) assembled on 2012-05-16
> FMO11721.5prime
CCCTCGACATGCATGCCAGATTTGCGGATCCCCAGCCAGCGTCTCCGGAC
AGCGTTGATGGAATCGAAACGGAGTCACTGGAGGCGCGGATTGAGGCCTT
CAAGCAAAATCCCCAGAACATGGCCGCGTTGCGGGAGGCGCTCGACGATG
TGCTCCTGCGGGCTGAGACGGAGGCGAACAGGCGGGCAGTTGAGAGCCAG
AAATCGCAACAGGGCAAGGAAAAACGACCGAGTTTCGCCATACCAGATTT
TAAGAACGGCAAGGTGGTGAATCACGCTCGAGGATTCGTGGTGCGGATCT
TCGATGCCATATGCAATTGCGCCAACAACAATGCGGCGGCGGCCACGACT
CGTTTCAAGCTGAGAAGCAACAGCGGTGGAGGGGGAGGCGGCGGAGGTGG
TGGTGGCGGAGCCAGCGGAAATGGCAAGCGTCAGCAGTCTCTTTATGAGC
CGGAAACCCTAGTCCTGACCAAGAAGGAGCCCGCCGGCGAATGCAAGAAA
AAGAAGGGAGTCAGCATGGCCGATGACGTTCAAGACGGCGTTCGACTGAT
GGACGCAAGCTTTCTATACCAT
FMO11721.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:46:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9368-RA | 1828 | CG9368-RA | 141..686 | 9..554 | 2565 | 98 | Plus |
CG9368-RB | 1813 | CG9368-RB | 141..671 | 9..554 | 2330 | 95.2 | Plus |
CG9368-RD | 2423 | CG9368-RD | 959..1281 | 232..554 | 1465 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19602656..19602978 | 232..554 | 1465 | 96.9 | Plus |
3L | 28110227 | 3L | 19601773..19601977 | 9..213 | 1010 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:46:36 has no hits.
FMO11721.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-16 10:41:07 Download gff for
FMO11721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9368-RA | 119..677 | 9..568 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:10 Download gff for
FMO11721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9368-RA | 141..699 | 9..568 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:31 Download gff for
FMO11721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9368-RA | 141..699 | 9..568 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:31 Download gff for
FMO11721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19601773..19601976 | 9..212 | 99 | -> | Plus |
3L | 19602042..19602060 | 213..231 | 100 | -> | Plus |
3L | 19602656..19602991 | 232..568 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:10 Download gff for
FMO11721.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19594873..19595076 | 9..212 | 99 | -> | Plus |
arm_3L | 19595142..19595160 | 213..231 | 100 | -> | Plus |
arm_3L | 19595756..19596091 | 232..568 | 95 | | Plus |