Clone FMO11726 Report

Search the DGRC for FMO11726

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:26
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG18649-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11726.5prime Sequence

302 bp (302 high quality bases) assembled on 2012-05-29

> FMO11726.5prime
CAGTCGACATGCGTGCCTATTTGCTGCTTGCCCTGTTTGGATGTGTGCTT
TTGGCCACAGTTTCCGCAAATCCGGTGGACATTGACGACTTGGAGGACCT
CGAGGAGGACAAACGAATTGCTGATGAGCAGGATAATGCTAACGATGATG
AGAAAGACGATGAGGATTCAAATGAACCCGAGTCCGACGACGACTTAGAT
GAGCCTGAATCCCCGGAGGACGATTCCCAGAACAATGATGATTCCGAAAG
CGACGAGAGCATCCAGTACAATCAAGATGAAGAGGCAAGCTTTCTAGACC
AT

FMO11726.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG18649-RB 568 CG18649-RB 33..308 9..284 1380 100 Plus
CG18649-RA 489 CG18649-RA 33..308 9..284 1380 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15053828..15054103 284..9 1380 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:53:12 has no hits.

FMO11726.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:03 Download gff for FMO11726.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18649-RA 24..314 1..296 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:01 Download gff for FMO11726.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18649-RA 26..316 1..296 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:37 Download gff for FMO11726.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18649-RA 26..316 1..296 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:37 Download gff for FMO11726.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15053820..15054110 1..296 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:01 Download gff for FMO11726.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15046920..15047210 1..296 96   Minus