FMO11727.5prime Sequence
584 bp (584 high quality bases) assembled on 2012-05-29
> FMO11727.5prime
CAGTCGACATGGTGCAGGTTTGGTATATGGATACGGAGGAAACCGATCAG
CGCCTGGAGCACCACCGCAATCCGCCTGCCTACTTGGAACTGGATGATCT
GTACCAGAAGACCGGCGTGGAATACTTTAAGATCAATGCGGACGAGTACC
AGAGCGATAATACCCTCACGGAACTGAGGGCAAAACGTGGCTACACCTAC
GATGATGAGATCACATGCTCGGAAAAGTGCCTTCCAGACTATGCCAACAA
GTTGAAAGCCTTTTTCACCGAACACCTGCACACGGATGAGGAAATTCGCC
TGATATTGGAGGGATCCGGTTACTTTGATGTTCGCGACAATGAGGACAAC
TGGTTGCGCATTAAGGTTGTCAAGGGAGATCTGATCATTATACCAGCTGG
CATATATCACCGCTTTACTTTGGATACCAATAACTTTATCAGAACTCGTC
GCTATTTTGTGGGCGAACCTGTCTGGGCTCCACACAATCGTCCTGCTGAT
GAAATGGACTGTCGCAAATCGTACATCAAGCATCAGTCGGAAAACTTTGT
GCAATTCAATAAGGTTGCAAGCTTTCTAGACCAT
FMO11727.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32068-RB | 701 | CG32068-RB | 71..628 | 9..566 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10664228..10664362 | 432..566 | 675 | 100 | Plus |
| 3L | 28110227 | 3L | 10663788..10663917 | 208..337 | 650 | 100 | Plus |
| 3L | 28110227 | 3L | 10663446..10663568 | 9..131 | 615 | 100 | Plus |
| 3L | 28110227 | 3L | 10664075..10664168 | 338..431 | 470 | 100 | Plus |
| 3L | 28110227 | 3L | 10663648..10663727 | 130..209 | 400 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:53:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 3299..3400 | 506..407 | 136 | 62.1 | Minus |
FMO11727.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:04 Download gff for
FMO11727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32068-RB | 49..618 | 1..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:04 Download gff for
FMO11727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32068-RB | 62..631 | 1..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:39 Download gff for
FMO11727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32068-RB | 62..631 | 1..570 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:39 Download gff for
FMO11727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10663437..10663568 | 1..131 | 97 | -> | Plus |
| 3L | 10663650..10663727 | 132..209 | 100 | -> | Plus |
| 3L | 10663790..10663917 | 210..337 | 100 | -> | Plus |
| 3L | 10664075..10664168 | 338..431 | 100 | -> | Plus |
| 3L | 10664228..10664365 | 432..570 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:04 Download gff for
FMO11727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10656537..10656668 | 1..131 | 97 | -> | Plus |
| arm_3L | 10656750..10656827 | 132..209 | 100 | -> | Plus |
| arm_3L | 10656890..10657017 | 210..337 | 100 | -> | Plus |
| arm_3L | 10657175..10657268 | 338..431 | 100 | -> | Plus |
| arm_3L | 10657328..10657465 | 432..570 | 98 | | Plus |
