Clone FMO11731 Report

Search the DGRC for FMO11731

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:31
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31808-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11731.5prime Sequence

194 bp (194 high quality bases) assembled on 2012-05-29

> FMO11731.5prime
CAGTCGACATGAAGATGAGCTCGCCCAGGATCATGCAGCAGAAACGGAGC
AGCAAGTCCTCCAATTCGTCGCGGGTCTCCATGACCACCTCGACGGCGGA
GGAGAATCTCATAGAATCGAAGCTCTTCAGCTGGATGCGTCTATTCCGAT
TCGCCTCGCTGCTCTGCCGCGCCGAGGCAAGCTTTCTAGACCAT

FMO11731.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG31808-RC 1929 CG31808-RC 523..690 9..176 840 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16705525..16705692 176..9 840 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:53:33 has no hits.

FMO11731.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:07 Download gff for FMO11731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31808-RC 510..689 1..180 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:12 Download gff for FMO11731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31808-RC 514..693 1..180 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:46 Download gff for FMO11731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31808-RC 514..693 1..180 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:46 Download gff for FMO11731.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16705522..16705699 1..180 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:12 Download gff for FMO11731.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16705522..16705699 1..180 96   Minus