FMO11737.5prime Sequence
434 bp (434 high quality bases) assembled on 2012-05-16
> FMO11737.5prime
CAGTCGACATGGCGGCATTGTGCTTAGACTTTCTCGGCTTCCAGGAGGCA
CTGAAGAAGATGCGAGATGTGGACGACAAGATTATATATGCACTAAATGC
CCTGCCAACGGAGTCGTTTAAGGGTCAAGTGAACAGTGAAAGCACCTGTC
GCGATCTGTACGCGAAGCTCCAGGAGTCACACTTGGCCAGGCAAGAAAGC
ATACGCAGTTGCATAACAATTTCGGCTAGTAATCTGAAGAAGCTAAGGGA
AAAGCGGGAGACCCAGCCGGATGATGTGGATACGGATAACCAGTTTAGGG
CGGAGCAGCGCAAGCTGCGGGTTCTCCAGGCCGAGCTCAATGTCGAGGAC
ATCATTAAAGATCGTTCCTACAAGACCTTCAATGAACGATGCCGGTCCTA
TTTTCATGCTGGCCAAGCAAGCTTTCTAGACCAT
FMO11737.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15881-RA | 660 | CG15881-RA | 108..515 | 9..416 | 2040 | 100 | Plus |
CG15881-RC | 671 | CG15881-RC | 108..526 | 9..416 | 1920 | 97.4 | Plus |
CG15881-RB | 1642 | CG15881-RB | 1123..1497 | 42..416 | 1875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19806303..19806452 | 42..191 | 750 | 100 | Plus |
3L | 28110227 | 3L | 19806509..19806632 | 191..314 | 620 | 100 | Plus |
3L | 28110227 | 3L | 19806684..19806787 | 313..416 | 520 | 100 | Plus |
3L | 28110227 | 3L | 19806202..19806238 | 9..45 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:46:58 has no hits.
FMO11737.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-16 10:41:20 Download gff for
FMO11737.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15881-RA | 83..496 | 3..416 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:22 Download gff for
FMO11737.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15881-RA | 102..515 | 3..416 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:41 Download gff for
FMO11737.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15881-RA | 102..515 | 3..416 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:41 Download gff for
FMO11737.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19806510..19806632 | 192..314 | 100 | -> | Plus |
3L | 19806686..19806787 | 315..416 | 100 | | Plus |
3L | 19806196..19806237 | 3..44 | 92 | -> | Plus |
3L | 19806306..19806452 | 45..191 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:22 Download gff for
FMO11737.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19799296..19799337 | 3..44 | 92 | -> | Plus |
arm_3L | 19799406..19799552 | 45..191 | 100 | -> | Plus |
arm_3L | 19799610..19799732 | 192..314 | 100 | -> | Plus |
arm_3L | 19799786..19799887 | 315..416 | 100 | | Plus |