Clone FMO11737 Report

Search the DGRC for FMO11737

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:37
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15881-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11737.5prime Sequence

434 bp (434 high quality bases) assembled on 2012-05-16

> FMO11737.5prime
CAGTCGACATGGCGGCATTGTGCTTAGACTTTCTCGGCTTCCAGGAGGCA
CTGAAGAAGATGCGAGATGTGGACGACAAGATTATATATGCACTAAATGC
CCTGCCAACGGAGTCGTTTAAGGGTCAAGTGAACAGTGAAAGCACCTGTC
GCGATCTGTACGCGAAGCTCCAGGAGTCACACTTGGCCAGGCAAGAAAGC
ATACGCAGTTGCATAACAATTTCGGCTAGTAATCTGAAGAAGCTAAGGGA
AAAGCGGGAGACCCAGCCGGATGATGTGGATACGGATAACCAGTTTAGGG
CGGAGCAGCGCAAGCTGCGGGTTCTCCAGGCCGAGCTCAATGTCGAGGAC
ATCATTAAAGATCGTTCCTACAAGACCTTCAATGAACGATGCCGGTCCTA
TTTTCATGCTGGCCAAGCAAGCTTTCTAGACCAT

FMO11737.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG15881-RA 660 CG15881-RA 108..515 9..416 2040 100 Plus
CG15881-RC 671 CG15881-RC 108..526 9..416 1920 97.4 Plus
CG15881-RB 1642 CG15881-RB 1123..1497 42..416 1875 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19806303..19806452 42..191 750 100 Plus
3L 28110227 3L 19806509..19806632 191..314 620 100 Plus
3L 28110227 3L 19806684..19806787 313..416 520 100 Plus
3L 28110227 3L 19806202..19806238 9..45 185 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:46:58 has no hits.

FMO11737.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-16 10:41:20 Download gff for FMO11737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15881-RA 83..496 3..416 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:22 Download gff for FMO11737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15881-RA 102..515 3..416 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:41 Download gff for FMO11737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15881-RA 102..515 3..416 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:41 Download gff for FMO11737.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 19806510..19806632 192..314 100 -> Plus
3L 19806686..19806787 315..416 100   Plus
3L 19806196..19806237 3..44 92 -> Plus
3L 19806306..19806452 45..191 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:22 Download gff for FMO11737.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19799296..19799337 3..44 92 -> Plus
arm_3L 19799406..19799552 45..191 100 -> Plus
arm_3L 19799610..19799732 192..314 100 -> Plus
arm_3L 19799786..19799887 315..416 100   Plus