Clone FMO11739 Report

Search the DGRC for FMO11739

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:39
Vector:pMK33-CFH-BD
Associated Gene/TranscriptTwdlBeta-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11739.5prime Sequence

620 bp (620 high quality bases) assembled on 2012-05-29

> FMO11739.5prime
CAGTCGACATGCAGACGCAGTGTATCCTCCTTCTCTTGGCCGCCAGTCTG
GCCATATGTGTGGCGCGTCCGGAACCACCTAGATCGCGTTACGGACCGCC
GCCACCGCCGGCTCCCCAAAAGGAATACGGTCCTCCGGCCCCGGCAGCAC
AGCCTCTACCCGTTTACGGACCACCAGCCGCCTTCTACGGACCACCAGCC
GCCTCGGAGGCGCTCGTGACCAAGAACGTGTACGTGCATGTGCCGCCAGA
GGAGCCAGAGTTCTATCCGGCCTCGTCGCCCATCCAGACGGCCGTTCCCA
AGAAGCACTACAAGATCATCTTCATCAAGGCGCCCAACCCTCCGACCCCT
GTGCGCCAGGTGCTCCCTCCTCCGGTCCAGGATGAGCACAAGACCCTTGT
GTATGTTCTGGTCAAGAAGCCCGAGGAGCAGCAGCCCGTCATCCTGCCCG
CTCCAGAGCCCACAGAGCCCAGCAAGCCAGAGGTCTACTTCATCAAGTAT
AAGCAGCAGCAGGCCAAGCCGGCCACCCAGTACGGCCCACCACCGTCCGC
CCCATCCGAGGAGTACGGAGCACCACCTGCCCCCCGCACCGTCGAGCAGT
TCGCAAGCTTTCTAGACCAT

FMO11739.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:38
Subject Length Description Subject Range Query Range Score Percent Strand
TwdlBeta-RA 716 CG8986-RA 37..631 8..602 2975 100 Plus
lectin-28C-RC 3044 CG7106-RC 1629..1733 494..390 180 78.1 Minus
TwdlE-RA 1346 CG14534-RA 494..598 390..494 180 78.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11862622..11863216 602..8 2975 100 Minus
2L 23513712 2L 7858705..7858809 494..390 180 78.1 Minus
Blast to na_te.dros performed on 2014-11-28 03:00:37 has no hits.

FMO11739.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:30 Download gff for FMO11739.5prime
Subject Subject Range Query Range Percent Splice Strand
TwdlBeta-RA 27..633 1..611 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:48 Download gff for FMO11739.5prime
Subject Subject Range Query Range Percent Splice Strand
TwdlBeta-RA 31..637 1..611 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:45:26 Download gff for FMO11739.5prime
Subject Subject Range Query Range Percent Splice Strand
TwdlBeta-RA 31..637 1..611 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:45:26 Download gff for FMO11739.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11862616..11863222 1..611 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:48 Download gff for FMO11739.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7750121..7750727 1..611 98   Minus