FMO11742.5prime Sequence
671 bp (671 high quality bases) assembled on 2012-05-29
> FMO11742.5prime
CAGTCGACATGGAGGAGACATATCTGTACGATCCTAATCTGCTGCTAAAG
CTGGACTTTCATCGCAGTCCCGCCAACTTTAAGCCCTTCATATCGGCGGC
CAATCCCGGCGAGCCCTGGATGAAAGTGCGTCCTCTCAAGGACACCGACT
ACGATCGTGGATTCCTGCAGCTGCTCTCGCAACTCACCCATGTCGGCAAT
GTGAATCGTACGCAGTTCTTGACCCGCTTTTCGCAGATGAAAGCCAGTGG
GGACTACTTTGTCACCGTCATTGAGGACACTCGCAAGAATGAGATTATTG
GAGCTGCATCCTTGGTGATCGAGCGCAAGTTCATCCATAACTGTGCTGTG
CGTGGCCGTCTAGAGGATGTGGTGGTCAATGACACGTATCGCGGGAAGCA
ACTGGGAAAACTGATCGTGGTCACCGTATCGCTGCTGGCCGAGGAACTGG
GCTGCTACAAAATGTCGCTGGACTGCAAGGACAAGCTGATCAAGTTCTAT
GAGTCGCTGGGCTATGTGGCCATTCCCGGAAACTCCAACTCCATGACGAT
TCGCTACGATGAGGGGCCAACGCTCAAGCGGAATGCTACCTCAGCCGGCT
CCAGTGGAACAGTGGGCGACTCCTGCCAAACTGTGAGCCTCGATTTTGCC
TCTGCAAGCTTTCTAGACCAT
FMO11742.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1969-RF | 1341 | CG1969-RF | 134..779 | 8..653 | 3230 | 100 | Plus |
CG1969-RG | 1495 | CG1969-RG | 288..933 | 8..653 | 3230 | 100 | Plus |
CG1969-RB | 1341 | CG1969-RB | 134..779 | 8..653 | 3230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29741150..29741390 | 413..653 | 1205 | 100 | Plus |
3R | 32079331 | 3R | 29740567..29740778 | 11..222 | 1060 | 100 | Plus |
3R | 32079331 | 3R | 29740840..29740967 | 223..350 | 640 | 100 | Plus |
3R | 32079331 | 3R | 29741028..29741091 | 350..413 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:00:44 has no hits.
FMO11742.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:32 Download gff for
FMO11742.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1969-RB | 132..785 | 8..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:52 Download gff for
FMO11742.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1969-RB | 134..787 | 8..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:45:30 Download gff for
FMO11742.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1969-RB | 134..787 | 8..661 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:45:30 Download gff for
FMO11742.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29740558..29740778 | 1..222 | 98 | -> | Plus |
3R | 29740840..29740967 | 223..350 | 100 | -> | Plus |
3R | 29741029..29741090 | 351..412 | 100 | -> | Plus |
3R | 29741150..29741398 | 413..661 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:52 Download gff for
FMO11742.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25566280..25566500 | 1..222 | 98 | -> | Plus |
arm_3R | 25566562..25566689 | 223..350 | 100 | -> | Plus |
arm_3R | 25566751..25566812 | 351..412 | 100 | -> | Plus |
arm_3R | 25566872..25567120 | 413..661 | 98 | | Plus |