FMO11743.5prime Sequence
344 bp (344 high quality bases) assembled on 2012-05-29
> FMO11743.5prime
CAGTCGACATGCGTCACGCTGTGATCCTTGTTTTCGTGTGTTGCCTGCTG
ATCGCCTTAACCTCAGCCGGTTTGCTGGGCGGTGGAGGCGGTGGTGGTGG
CTACGGCGGTGGTGGTGGTGGTGGCTACGGCGGTGGTGGTGGTGGTCAGA
GCGGCTACGGCGGCGGTGGCCAAAAGAACGGAGGAGGCGGCCATGGAGGT
GGCGGCCAGGGAAGCTACGGAGGCGGTAGCCAAGGTGGACATGGAGGCGG
TGGCCAAGGAGGTTGGCAGAAGAACGGAGGAGGTGCAGCTAATCCACCGT
CTGATGCTGACTTGTGTTCCATGGCAGCAAGCTTTCTAGACCAT
FMO11743.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5172-RC | 531 | CG5172-RC | 106..423 | 9..326 | 1590 | 100 | Plus |
CG5172-RD | 788 | CG5172-RD | 106..382 | 9..285 | 1385 | 100 | Plus |
CG5172-RD | 788 | CG5172-RD | 635..680 | 281..326 | 215 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17221547..17221773 | 9..235 | 1135 | 100 | Plus |
X | 23542271 | X | 17222124..17222176 | 233..285 | 265 | 100 | Plus |
X | 23542271 | X | 17222498..17222543 | 281..326 | 215 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:53:45 has no hits.
FMO11743.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:09 Download gff for
FMO11743.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5172-RC | 103..423 | 2..326 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:19 Download gff for
FMO11743.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5172-RC | 103..423 | 2..326 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:52 Download gff for
FMO11743.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5172-RC | 103..423 | 2..326 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:52 Download gff for
FMO11743.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17221544..17221772 | 2..234 | 98 | -> | Plus |
X | 17222126..17222176 | 235..285 | 100 | -> | Plus |
X | 17222503..17222543 | 286..326 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:19 Download gff for
FMO11743.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17115577..17115805 | 2..234 | 98 | -> | Plus |
arm_X | 17116159..17116209 | 235..285 | 100 | -> | Plus |
arm_X | 17116536..17116576 | 286..326 | 100 | | Plus |