FMO11747.5prime Sequence
1049 bp (-63 high quality bases) assembled on 2012-05-16
> FMO11747.5prime
CAGTCGACATGTCGATATCAGCTTCGCACCCGTGCGGGTTAAACGCTGAT
GGCACAGCCACCCAGTATAAAGAATCTACGGCCACCATACAAACTTCTGG
TCTTCAGTCATCACCTAGGTCCTTTCTACCAGAGCGAGAGGATACGTTAG
AGTACTTCATAAAGTTTCCGAAGCCTTCATCTAAAAATGAGTTTGTACTA
GCTAAGGACCATGATGGCGAGGACAGCCACGTGCCCATTGTCATGCTGTT
GGGGTGGGCGGGCTGTCAGGATCGATACCTCATGAAATACTCAAAAATTT
ACGAGGAGCGGGGCTTAATTACTGTGCGATACACGGCTCCGGTAGACAGC
CTATTTTGGAAGCGATCTGAAATGATTCCTATCGGCGAGAAAATCCTTAA
ACTAATCCAGGACATGAATTTTGACGCCCATCCACTAATATTTCACATAT
TTTCCAATGGCGGAGCCTACTTGTACCAACATATTAATTTAGCTGTGATC
AAGCACAAGTCTCCGCTGCAAGTTCGCGGCGTGATTTTTGACTCTGCTCC
TGGGGAGCGTAGGATAATAAGCCTGTATCGCGCCATTACAGCCATCTATG
GTAGGGAAAAACGCTGCAACTGTTTGGCCGCACTGGTTATAACCATTACA
CTCAGTATTATGTGGTTTGTGGAGGAATCAATTTCTGCCTTGAAAAGCCT
ATTCGTGCCGTCTTCGCCAGTACGCCCCAGTCCATTTTGCGACCTTAAAA
ACGAAGCCAATAGATACCCACAGCTTTTTCTGTATTCGAAAGGTGACATT
GTGATTCCCTATCGAGATGTGGAAAAATTTATTCGTCTTAGACGCGATCA
GGGTATTCAGGTATCGTCAGTATGCTTTGAGGATGCCGAGCACGTTAAGA
TTACACCAAATATCCCAAGCAGTACGTCCAGTGTGTGTGTAATTTTATTA
AGGACCTGCATGACATTCTCTTCTCAAGGAGGCTGTTAATCTGAGCATTC
GAAAGTGTGTCTCGGGTTACCTAAAATACAATGCAAGCTTTCTAGACAT
FMO11747.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:46:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8245-RA | 1316 | CG8245-RA | 145..1170 | 9..1029 | 4915 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5669058..5669420 | 313..675 | 1815 | 100 | Plus |
| 2R | 25286936 | 2R | 5668694..5668998 | 9..313 | 1525 | 100 | Plus |
| 2R | 25286936 | 2R | 5669479..5669840 | 673..1029 | 1440 | 97 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:46:54 has no hits.
FMO11747.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-16 10:41:19 Download gff for
FMO11747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8245-RA | 126..1163 | 1..1032 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:20 Download gff for
FMO11747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8245-RA | 136..1173 | 1..1032 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:40 Download gff for
FMO11747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8245-RA | 136..1173 | 1..1032 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:40 Download gff for
FMO11747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5669059..5669419 | 314..674 | 100 | -> | Plus |
| 2R | 5669481..5669843 | 675..1032 | 96 | | Plus |
| 2R | 5668685..5668998 | 1..313 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:20 Download gff for
FMO11747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1556190..1556503 | 1..313 | 98 | -> | Plus |
| arm_2R | 1556564..1556924 | 314..674 | 100 | -> | Plus |
| arm_2R | 1556986..1557348 | 675..1032 | 96 | | Plus |
