FMO11748.5prime Sequence
475 bp (473 high quality bases) assembled on 2012-05-29
> FMO11748.5prime
CAGTCGACATGTCCAGCCTGCGACCCGAGGAGGCCCGAAAACTGGCCACC
GCCGCCTCCGTTTCGCCGCTGAGCAATTGCCAATTTTGCGGCGTGGTAAT
CAGCTCGATTGCCGACGAGCAGAAGCTAGAGTTTACCAACAAATACAAGG
GAAGCTGCACGCTGCTCTGCAGCTACGATTCCCAGGGTGTCGTCCTCCGT
GTTGTGTCAGACGACGACCGGAGCCACGTGCTCAAGGAGTACATGATAGC
CGCCGATACGGATGCCGCCCAAATGGGACGAAGGAGTTATGCCGTTTCCC
TGGACGCCGACAATCTAGTGCTGAGGTTTGCCAGCGAGCAGGACCAGCAG
CTCTTCCGCAAAGTGGTGGAGAACGTGAAGCACTTGAGACCCAAGTCCGT
GTTCTCGCAGCGCACTGAGGAGTCGTCCGCCTCGCAGTATTTTCTGTTCT
ACGGCTACCTCAGTCAGCAGCAGAT
FMO11748.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Art4-RB | 3071 | CG5358-RB | 380..847 | 7..474 | 2295 | 99.4 | Plus |
| Art4-RA | 2701 | CG5358-RA | 380..847 | 7..474 | 2295 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9985152..9985418 | 474..208 | 1290 | 98.9 | Minus |
| 3R | 32079331 | 3R | 9985478..9985681 | 210..7 | 1020 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:00:34 has no hits.
FMO11748.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:30 Download gff for
FMO11748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art4-RA | 369..842 | 1..475 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:45 Download gff for
FMO11748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art4-RA | 374..847 | 1..475 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:45:24 Download gff for
FMO11748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art4-RA | 374..847 | 1..475 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:45:24 Download gff for
FMO11748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9985151..9985415 | 211..475 | 98 | <- | Minus |
| 3R | 9985478..9985687 | 1..210 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:45 Download gff for
FMO11748.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5810873..5811137 | 211..475 | 98 | <- | Minus |
| arm_3R | 5811200..5811409 | 1..210 | 99 | | Minus |
