FMO11752.5prime Sequence
697 bp (697 high quality bases) assembled on 2012-05-29
> FMO11752.5prime
CAGTCGACATGTGGAACGTATCCTCGATCCTGGAAGGGCTAGAGCATGAG
CAAGGAGTAAACGCGGACCTCCGCGGCAAGAACGTGTTCAACTTGTGCGT
GACCTTCTTGTGGATATTTCTGTGCATCTACGTCCTGTCCAAGCTAACCC
AACTCGTGGAGCTCTTTCTGTGCCAGCGGCTACTTGGCCAGAAGCAATGG
TACGACGTCCGCACGATCAAAAACGAGTGGGAGCAGACCCTCCAGCTTTA
TGAGGACGATAAAAGCCAGCTGGACGCACAGGTGCGCGAGTTGCGAGAAA
AGAACCTGAGTATGGAGCGCTTGATGGTGGACCTGCGAGACTACAACATC
CACTTGATCAGCGAAAACTATATGCTGTCCGTGATGCACGAACAGAAACC
AAGGCCGGCCGAGCCGAACATCTACATCACCAACAGCCACTTCCATCTCA
CTCGCCAGATGTTTCTGAACGATAGTCAAATCAATCTGAACGTCCATGAC
CATGGCGAGAAAGGAGCTTCCGGGGAGGGCAAAAATGTCTGGCTGCAGTA
TCTAAGGATGCGCAAGTGCTATATGAGCCCGATTGCCGATCCGAATTCGA
TAGATCCCAGCAGCACCACCAAGCAGATTCTCCCAATTGTTATGAGCACC
GAGCAGTTGGCCGAATTGCAGGCATGATCGCAAGCTTTCTAGACCAT
FMO11752.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14589-RA | 882 | CG14589-RA | 125..796 | 9..679 | 3335 | 99.9 | Plus |
| CG14589-RC | 877 | CG14589-RC | 125..786 | 9..670 | 3310 | 100 | Plus |
| CG14589-RB | 768 | CG14589-RB | 390..682 | 388..679 | 1425 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6137427..6137813 | 9..395 | 1935 | 100 | Plus |
| 2R | 25286936 | 2R | 6137986..6138263 | 393..670 | 1390 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:54:00 has no hits.
FMO11752.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:12 Download gff for
FMO11752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14589-RA | 125..801 | 9..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:27 Download gff for
FMO11752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14589-RA | 125..801 | 9..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:00 Download gff for
FMO11752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14589-RA | 125..801 | 9..687 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:00 Download gff for
FMO11752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6137427..6137813 | 9..395 | 100 | -> | Plus |
| 2R | 6137989..6138269 | 396..677 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:27 Download gff for
FMO11752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2024932..2025318 | 9..395 | 100 | -> | Plus |
| arm_2R | 2025494..2025774 | 396..677 | 98 | | Plus |
