Clone FMO11754 Report

Search the DGRC for FMO11754

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:54
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7548-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11754.5prime Sequence

617 bp (617 high quality bases) assembled on 2012-05-29

> FMO11754.5prime
CAGTCGACATGGCTTACTTCCAGTTCCTCAGCGTTGCCTCCAGCTTGCTT
CTACTCCTGGCTCCCACCTGGGCAGGTCTGATTGCTCAGCCGACCATCAC
CTATGCTGGCAATGAGCACGCGGTGGCCCACACCCAACAGAATGTAGTAA
GGAGCTTCGATGGCACCGTCTCCCACTACGCCAAGTCGCTGGCCACGCCC
TACTCGCAGGTCCACAAGCAGGACACGCGGATCAGCAACAATGTCTACCA
GCCGGCTGTGGCCAAGACCTTCAGTTATGCTACAGCTCCAGCTCCGGTTT
ACACGCACCAGGCTCATCAGGAACCAAAAAATCTGTTTACTCAGGCATCG
CCAGTTTACCAGCAGGATGCTCATGTCCAGACTCCATCGGTTTACCAGCA
GGCTGCTCATGTCCAGACTCCATCGGTTTACCATCAGCCCGCTCAGGTGC
AGAGCTACCACCAACCTGGTCATGTGGAGGCACCTTCTGTTTACCAACAG
AACGCCCACTACAGCCACCAGCCTGCTGTCATCCACTATTCTCCGGCGGA
GACCGTCTCCCACATGAGCTTCGATGGTTTCGGTACCCACTACGGATTTG
CAAGCTTTCTAGACCAT

FMO11754.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG7548-RA 678 CG7548-RA 12..607 4..599 2965 99.8 Plus
CG7548-RA 678 CG7548-RA 398..461 354..417 230 90.6 Plus
CG7548-RA 678 CG7548-RA 362..425 390..453 230 90.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:54:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7505611..7506206 599..4 2965 99.8 Minus
3L 28110227 3L 7505757..7505820 417..354 230 90.6 Minus
3L 28110227 3L 7505793..7505856 453..390 230 90.6 Minus
Blast to na_te.dros performed on 2014-11-28 02:54:07 has no hits.

FMO11754.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:13 Download gff for FMO11754.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7548-RA 9..611 1..604 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:31 Download gff for FMO11754.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7548-RA 9..611 1..604 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:03 Download gff for FMO11754.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7548-RA 9..611 1..604 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:03 Download gff for FMO11754.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 7505607..7506209 1..604 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:31 Download gff for FMO11754.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7498707..7499309 1..604 99   Minus