Clone FMO11755 Report

Search the DGRC for FMO11755

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:55
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43054-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11755.5prime Sequence

434 bp (434 high quality bases) assembled on 2012-05-29

> FMO11755.5prime
CAGTCGACATGAATTGGTTCAATAATATATGCGAGGAAAGTCGCTTAAAG
TTTTTTCCCAATCTTCAAACAGTCAAAGCTAAGCGTAAATACGAAATTGG
CCTGATGAGCGCAGATGAGTGCTATAGTTTCATAAAGAAAAACCTGAAGT
CCAGAAATGTTGTAGAAGAAGAAATGTTGTGGAAAGTCCCCATAATTCTT
GTGTGTATCGGCTGCATAATAGTCATACTATTTGCATTTTGTTTCGCATT
TCAGTGTGTGATAACAAAGGTAAAGACCGCCAAAGTGCCAAAGCGTTTCG
ATTTCGACATTTGTGAAGCTGAAAAACCAAAAGCCCAACCAATCCACAAG
GCCAGCCAAATTGATCACCCAAAGAAAGTAACAAATTGCTGTACTTGTTT
AAAATCAAATCTACTTGCAAGCTTTCTAGACCAT

FMO11755.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG43054-RA 531 CG43054-RA 39..450 5..416 2030 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:54:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17627897..17628308 5..416 2030 99.5 Plus
Blast to na_te.dros performed on 2014-11-28 02:54:11 has no hits.

FMO11755.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:14 Download gff for FMO11755.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43054-RA 35..457 1..424 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:34 Download gff for FMO11755.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43054-RA 35..457 1..424 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:05 Download gff for FMO11755.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43054-RA 35..457 1..424 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:05 Download gff for FMO11755.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 17627893..17628315 1..424 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:34 Download gff for FMO11755.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17627893..17628315 1..424 98   Plus