Clone FMO11757 Report

Search the DGRC for FMO11757

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:57
Vector:pMK33-CFH-BD
Associated Gene/Transcriptkune-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11757.5prime Sequence

786 bp (786 high quality bases) assembled on 2012-05-16

> FMO11757.5prime
ATTTTAGCCCTTTGCGCGTCCGTGTTTTCCCTAATATGTTTTGTTATCGC
GTTTTCCACGCCTTATTGGCTGGTTACAGACGGCAGATTACAAAACCCGC
GATTCACTAACCTAGGCCTTTGGGAAGTTTGTTTCAACAACTTCCAGGAC
ATACACCGATTTTTTGACAATTCCTTTAACGGATGCCTATGGGTTTTCGA
AGAGGAATATTACATCATACACGACTTCCTCCTGCCTGGCTTCTACATAT
CCGTTCAACTTTTTGCTACGCTATGCTTTGTAATGTGCCTTGTTGTTATA
CCACTCACTGTAGCATTTCTTCGCACTTCTCGCGATGATGACAGGTACAT
GGTGCTCCTGCTGGCGATAGGATCATGCCAGGTTGTGGGCTCTGTTTTCG
GGTTTATTGCTGTGGTCATTTTTGGCGCCAAAGGAGATTCTCGGGATTGG
ATGCCAGGATGGCAGAACAATGATATGGGCTGGTCATTTGCTCTGGGCGT
TGTTGGCGCTGTGCTGCTACTGCCGTCTGGCGTACTCTATCTAGTAGAAG
CGCGTCGGGAAAGGTACAAGCGCTTAAACGAAATCAGCAATCGGGAGATC
AGTGAATACGGAGATGAGTATTACCAGAATCAGGGACCCTCCGCAGTGCT
TCCGACCGCTCCATCGCCATATCAATCCTATTTTGCATCTGAGCCAAGCC
GACCAAGAAGACCCCATCAAAAGTATTGCATCGAATTCCGCTGTACAAGG
AGGAATTCAACAGATATAGCAAGCTTTCTAGACCAT

FMO11757.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:30
Subject Length Description Subject Range Query Range Score Percent Strand
kune-RA 1060 CG1298-RA 125..886 7..768 3735 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:47:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 5671865..5672617 7..760 3690 99.6 Plus
Blast to na_te.dros performed on 2014-11-28 02:47:28 has no hits.

FMO11757.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-16 10:41:34 Download gff for FMO11757.5prime
Subject Subject Range Query Range Percent Splice Strand
kune-RA 89..858 1..772 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:35 Download gff for FMO11757.5prime
Subject Subject Range Query Range Percent Splice Strand
kune-RA 120..889 1..772 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:54 Download gff for FMO11757.5prime
Subject Subject Range Query Range Percent Splice Strand
kune-RA 120..889 1..772 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:54 Download gff for FMO11757.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 5671860..5672629 1..772 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:35 Download gff for FMO11757.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 1559365..1560134 1..772 98   Plus