Clone FMO11758 Report

Search the DGRC for FMO11758

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:58
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43072-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11758.5prime Sequence

272 bp (272 high quality bases) assembled on 2012-05-29

> FMO11758.5prime
CAGTCGACATGACCATGGAACTGCTTGCGCGGCACAATCTTCAGAAGGTT
GAACAGCTCACGACCTTCGATCTGAAATATTTCTTTATCATCTACGCCAT
CGTCGTCCTGATGATCCTGGGTGTTCCACTGGCCTTCCTACTTCAAAGCA
AGGGTTCGGCGAACGAAAGGGATCGTTTTCAATTGGAAGCCAATCGATCG
CGCGTGGATCCAGTGAGGGGAGAAACCCGGCGACGAATCCGGGATTCGAG
TGCCGCAAGCTTTCTAGACCAT

FMO11758.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG43072-RA 387 CG43072-RA 87..332 9..254 1230 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21065938..21066183 9..254 1230 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:53:49 has no hits.

FMO11758.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:10 Download gff for FMO11758.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43072-RA 1..249 9..258 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:22 Download gff for FMO11758.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43072-RA 84..343 2..263 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:54 Download gff for FMO11758.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43072-RA 84..343 2..263 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:54 Download gff for FMO11758.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21065935..21066194 2..263 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:22 Download gff for FMO11758.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21059035..21059294 2..263 96   Plus