Clone FMO11759 Report

Search the DGRC for FMO11759

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:59
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13069-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11759.5prime Sequence

319 bp (-61 high quality bases) assembled on 2012-05-16

> FMO11759.5prime
GTCAGTCGACATGTTCAAGTTCTTCGCCGTCGCCCTCTTCGCACTGATTG
CCTGCGTGGCCGCCAAGCCCGGAATCGTGGCTCCTCTGGCCTACTCCGCA
CCTCTGGTGGCTGCTGCTCCGGCGGCTGCGGTTTACAGCCGGGAATACCA
CGGAAATTTTGCGGCTCCCTACGTGGCATCTCCCTATGTGGCTTCTCCCT
ACGTGGCTTCTCCCTACGTCGCTTCCCCTTACGTGGCGTCTCCGTATGTG
GCATCTCCCTACGTTGCCGCCCCCTACACCGCTCCTCTGCTGCTGAAGAA
GGCAAGCTTTCTAGACCAT

FMO11759.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13069-RA 420 CG13069-RA 46..336 11..301 1455 100 Plus
CG13051-RA 388 CG13051-RA 36..124 11..99 355 93.3 Plus
CG13051-RA 388 CG13051-RA 126..191 167..232 210 87.9 Plus
CG13051-RA 388 CG13051-RA 126..197 212..283 195 84.7 Plus
CG13051-RA 388 CG13051-RA 124..176 225..277 190 90.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:47:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16265430..16265720 11..301 1455 100 Plus
3L 28110227 3L 16264977..16265065 99..11 355 93.3 Minus
3L 28110227 3L 16264910..16264975 232..167 210 87.9 Minus
3L 28110227 3L 16264904..16264975 283..212 195 84.7 Minus
3L 28110227 3L 16264925..16264977 277..225 190 90.6 Minus
Blast to na_te.dros performed on 2014-11-28 02:47:15 has no hits.

FMO11759.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-16 10:41:25 Download gff for FMO11759.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13069-RA 39..336 3..301 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:30 Download gff for FMO11759.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13069-RA 39..336 3..301 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:48 Download gff for FMO11759.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13069-RA 39..336 3..301 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:48 Download gff for FMO11759.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16265423..16265720 3..301 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:30 Download gff for FMO11759.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16258523..16258820 3..301 98   Plus