FMO11759.5prime Sequence
319 bp (-61 high quality bases) assembled on 2012-05-16
> FMO11759.5prime
GTCAGTCGACATGTTCAAGTTCTTCGCCGTCGCCCTCTTCGCACTGATTG
CCTGCGTGGCCGCCAAGCCCGGAATCGTGGCTCCTCTGGCCTACTCCGCA
CCTCTGGTGGCTGCTGCTCCGGCGGCTGCGGTTTACAGCCGGGAATACCA
CGGAAATTTTGCGGCTCCCTACGTGGCATCTCCCTATGTGGCTTCTCCCT
ACGTGGCTTCTCCCTACGTCGCTTCCCCTTACGTGGCGTCTCCGTATGTG
GCATCTCCCTACGTTGCCGCCCCCTACACCGCTCCTCTGCTGCTGAAGAA
GGCAAGCTTTCTAGACCAT
FMO11759.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13069-RA | 420 | CG13069-RA | 46..336 | 11..301 | 1455 | 100 | Plus |
CG13051-RA | 388 | CG13051-RA | 36..124 | 11..99 | 355 | 93.3 | Plus |
CG13051-RA | 388 | CG13051-RA | 126..191 | 167..232 | 210 | 87.9 | Plus |
CG13051-RA | 388 | CG13051-RA | 126..197 | 212..283 | 195 | 84.7 | Plus |
CG13051-RA | 388 | CG13051-RA | 124..176 | 225..277 | 190 | 90.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:47:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16265430..16265720 | 11..301 | 1455 | 100 | Plus |
3L | 28110227 | 3L | 16264977..16265065 | 99..11 | 355 | 93.3 | Minus |
3L | 28110227 | 3L | 16264910..16264975 | 232..167 | 210 | 87.9 | Minus |
3L | 28110227 | 3L | 16264904..16264975 | 283..212 | 195 | 84.7 | Minus |
3L | 28110227 | 3L | 16264925..16264977 | 277..225 | 190 | 90.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:47:15 has no hits.
FMO11759.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-16 10:41:25 Download gff for
FMO11759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13069-RA | 39..336 | 3..301 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:30 Download gff for
FMO11759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13069-RA | 39..336 | 3..301 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:48 Download gff for
FMO11759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13069-RA | 39..336 | 3..301 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:48 Download gff for
FMO11759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16265423..16265720 | 3..301 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:30 Download gff for
FMO11759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16258523..16258820 | 3..301 | 98 | | Plus |