Clone FMO11766 Report

Search the DGRC for FMO11766

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:66
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12491-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11766.5prime Sequence

497 bp (497 high quality bases) assembled on 2012-05-29

> FMO11766.5prime
CAGTCGACATGAGACCCGAATTCGTCCTGGCCTTTGGTTTGGTTGTCCTC
GTGGCGACCGTTTATGGTGGCACCGACTCATCCTCGAGCGACTCGTCCTC
TTCCACATCACCCACTTCCAATTCATCGACTCCATCGACTTCCAGCTCAA
GTTCGACACCCAGCTCTTCGTCCTCCACCTCAACTCCGTCCAGCAATAGC
ACTACGTCTACTTCGTCCTCCACTCCTAGCAGCTCTTCTTCCACTTCGCC
CACTTCCTCCACCTCATCGACGACTGCCACAACCACGGCCCCCTCCACGT
CCAGCGACACGTCCTCCTCCTCCACGAGCTCCGACAGCGAGGAGGTGGAC
AGGCTGAGGCGCAGGCTTCGCAGGCTCCGGCGGCTGAGGCGTCAGGAGAG
GCGCCAGGAGATTCGCCGGGAGAGGCAGCAGGAAAGGCGCTAGCTGAGTC
GTGCTGGAAGAAGGCGCCAACGTAGGGGAGCAAGCTTTCTAGACCAT

FMO11766.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG34105-RA 574 CG34105-RA 40..510 9..479 2325 99.6 Plus
CG12491-RA 580 CG12491-RA 40..510 9..479 2325 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:54:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23749382..23749852 479..9 2325 99.6 Minus
2R 25286936 2R 23750685..23751155 9..479 2325 99.6 Plus
Blast to na_te.dros performed on 2014-11-28 02:54:29 has no hits.

FMO11766.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:17 Download gff for FMO11766.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34105-RA 1..474 9..483 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:46 Download gff for FMO11766.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34105-RA 40..513 9..483 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:13 Download gff for FMO11766.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12491-RA 40..513 9..483 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:13 Download gff for FMO11766.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 23750685..23751158 9..483 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:46 Download gff for FMO11766.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19638208..19638681 9..483 99   Plus