FMO11768.5prime Sequence
1162 bp (953 high quality bases) assembled on 2012-05-16
> FMO11768.5prime
TCTCTCGGTCACAACTCCAGGCGGCAGTTCGGGTGCTCCGGACAGTGGTC
GCCACAACAGCTTGGAGGAGATCAATCTGGACCAGTTCCTGAAAACGTCC
AACTACGAGGACACGGTGAAGCAGCTGGACATCTACTATGGCATTGTCAA
GCGTCAACTGCTGCGATACCAGAGTCCCATCACCGGTTTGTTTCCGGTGA
TGAGCACCGACCAGGTGGTGGGATCGGTGCGGGACAGTGTGTATTGCGCA
TCCGCCGTGTGGAGCTTGTACCAGGCGTACAGACGGATCGACGATGACCG
CGGAAAGTCCTACGAACTGGGCCAGAGCACTGTGAAGTGCATGCGAGGCA
TTCTTGAGTGCTGGGTCAAGCAGGCATCGCGGGTGGAGCTCTTTAAGCAG
CGCCAGTCCAATCAGCACGCACTGCATAGCAAATTCCAGCTGCACACCGG
AGAGAAGATATATCCGGATGAGTTTTACAATCACCTACAGATAGATTGCG
TTTCTCTCTATCTGTTGTTCCTCGTCCAGATGATAACCTCTGGCCTGCAG
ATCATTTACACCCACGACGAGGTGGCCTTTGTCCAGAATCTAGTGTACTA
TGTGGAGCGCGCCTATCGTACGCCCGACTTTGGCATGTGGGAGCGGGGCT
CTAAATATAACAATGGCACCCCGGAGATCCATGCCTCCTCCATTGGCATG
GCTAAGTCCGCCTTGGAGGCCATTAACGGGTGCAATCTGTTCGGCGAGAA
AGGAGCTTCCATGGAGCGTTGTCTATGTGGACATTGATGCCCACAACCGG
AATCGCAGTATTTTCGAAACCATGCTGCCCAGGGAATCAAGCTCAAAGGG
AGTTGATGCCTTCACTGCTTCTCACCCTTTCTTTCCCAGCCTTTGCCTCG
CATGAGATCGCCTGGCTGAGCAGACCAAACAAAATGTTGTAATCGTTGCG
CTGCAAATGGGGCTTTAGCGCTTACCCGTGATGGATTCCCTCAGCAAAAC
GAGGAAAAATCCGCGACGCTTATTATCACTTCTGGCGAGCTATAGGAATT
CGAAGGCCCTGAAATGTGGAATGCGCCTCTTTTTCCTAGCCATGAATTTA
TCGAATGGCGGTGTTTCAAAGAAATACAGTACAAATTTGAAAGAGTTCCA
AACGCAATTTGA
FMO11768.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8475-RC | 3731 | CG8475-RC | 130..1274 | 1..1152 | 5005 | 96.7 | Plus |
| CG8475-RB | 5361 | CG8475-RB | 130..1274 | 1..1152 | 5005 | 96.7 | Plus |
| CG8475-RA | 3570 | CG8475-RA | 130..1274 | 1..1152 | 5005 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:47:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8196035..8196390 | 501..146 | 1780 | 100 | Minus |
| 2L | 23513712 | 2L | 8195628..8195976 | 849..500 | 1700 | 99.7 | Minus |
| 2L | 23513712 | 2L | 8196584..8196729 | 146..1 | 730 | 100 | Minus |
| 2L | 23513712 | 2L | 8195323..8195571 | 1095..847 | 485 | 88.6 | Minus |
Blast to na_te.dros performed 2014-11-28 02:47:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Uvir | 6564 | Dvir\Uvir VIRUVIR 6564bp | 1218..1268 | 740..690 | 111 | 68.6 | Minus |
FMO11768.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-16 10:41:39 Download gff for
FMO11768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8475-RB | 105..1162 | 1..1058 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:42 Download gff for
FMO11768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8475-RA | 130..1187 | 1..1058 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:00 Download gff for
FMO11768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8475-RA | 130..1187 | 1..1058 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:00 Download gff for
FMO11768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8195629..8195976 | 500..848 | 99 | <- | Minus |
| 2L | 8196037..8196389 | 147..499 | 100 | <- | Minus |
| 2L | 8196584..8196729 | 1..146 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:42 Download gff for
FMO11768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8195629..8195976 | 500..848 | 99 | <- | Minus |
| arm_2L | 8196037..8196389 | 147..499 | 100 | <- | Minus |
| arm_2L | 8196584..8196729 | 1..146 | 100 | | Minus |
