Clone FMO11770 Report

Search the DGRC for FMO11770

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:70
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42729-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11770.5prime Sequence

548 bp (548 high quality bases) assembled on 2012-05-16

> FMO11770.5prime
CTTGCCTGTTACCTGGCTACCTCTGGGTGCAGGTGCAGGCGGTTTTTCTC
GAGGAATGCAAAGGTGTGATCATCAATAAGGTGACCAATGAGAATCAGGA
GTGCAGTGAGTTTGTTCACTGCGATGGCGATGATTCCTACTACTGCAATG
GGGATTGTCGTGAGGCCGTGGAGTGTTATACCAATGTGGTTACCACACCG
GTTACCACATTAAGACCCATAGGAACCTCTACGGAACGAGCACCATCCGC
AGAGCCAGTCAATACTACATCTACGACTTTAGCTACTACCACGCCAACAA
CGATTGCTGTAACCACGACTACAAGCCAAGTTCCGAGCACCGATGTCTAT
GTCATCTGCAAGACGAGTGGAAGGAACGGGGTCTATCCCTATCCGGCAAA
TAGCAATTACTATTATCAGTGTATTTCCGGTTATCTGTTGCTCCAGCAGT
GCCCACAGAATTTCCATTTCGATGTCGCCCAGGGACAGTGCGTTGCCACA
AAACCCAATCGTTCATCGGGCTTACGTTTGGCAAGCTTTCTAGACCAT

FMO11770.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:47:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG42729-RA 607 CG42729-RA 36..563 3..530 2640 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:47:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15526954..15527481 530..3 2640 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:47:33 has no hits.

FMO11770.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-16 10:41:35 Download gff for FMO11770.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42729-RA 26..558 1..534 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:27:37 Download gff for FMO11770.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42729-RA 34..570 1..538 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:55 Download gff for FMO11770.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42729-RA 34..570 1..538 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:55 Download gff for FMO11770.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15526947..15527482 1..538 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:27:37 Download gff for FMO11770.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15520047..15520582 1..538 99   Minus