Clone FMO11774 Report

Search the DGRC for FMO11774

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:74
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11588-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11774.5prime Sequence

763 bp (763 high quality bases) assembled on 2012-05-29

> FMO11774.5prime
CAGTCGACATGACGTCAAGGCTAATCCTTCTTCTATCGGTCTTTGGGGTT
ATTCCAAACGCGATGATCCCGAAAAGTCCAGTCAATATCGATGTATGTCC
CCGATCATCCCGGAAATCAGAGTCTAGCTATTTGATGGCCGAATATGGAG
ATGGATTAATTACCCGCATTGATGAGGGCAACTGGAAGGAAGTGCTTACT
GGCGAGTGGCTTTTGCTAATCTGTTCGTCACACCAGCCGAGTTGCGGAGA
TTGGAAAGCGGTCTTATACCAGCTGGCTAGCACCTCAATGGGTTGCCTCG
ATGTGGACTTGGCTTTTGGTGATCTCTCCACCAATTTTTGGCTAAGGGGA
CGATTTTCCGCCTTTCGGGAGGCTAACGTGTACCATGTGGTGGATGGGGA
ATTTCGGAGACTGAGCTCCAGCCACGATACTAACTCCATTCTCAATCTTT
TGCTTCTGCGCGAATGGTCAGAGTTACCTCCAATGCCATTTTGGTTACAT
CCGACCTCCACATGGAGCACATCCGCCGAATTTGTTTTAAAAACGGCCGT
GGATCTAAAGGACTTGGATATTCTTGGGCGCAACGCTTGGAAGACCGCCC
TTATTCTGGACTTAATTTTTTTCATCGTAACACCGTACATTTTATGGCTT
ACTATAATGACAACTACGGAGAATATGATGGTGAATGATGAATTTAAGCT
AGGACCAACCGAAAGTAGTAGTCCACTTCCCGCTGAAATCGATTTTCTAA
AATTAAAAAGCAC

FMO11774.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG11588-RB 1087 CG11588-RB 104..851 9..758 3700 99.7 Plus
CG11588-RA 975 CG11588-RA 104..851 9..758 3700 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:54:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11921616..11922363 9..758 3650 99.7 Plus
Blast to na_te.dros performed on 2014-11-28 02:54:42 has no hits.

FMO11774.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:20 Download gff for FMO11774.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11588-RA 48..802 2..763 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:55 Download gff for FMO11774.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11588-RA 101..855 2..763 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:19 Download gff for FMO11774.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11588-RA 101..855 2..763 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:19 Download gff for FMO11774.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11921613..11922367 2..763 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:55 Download gff for FMO11774.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11914713..11915467 2..763 99   Plus