FMO11777.5prime Sequence
479 bp (479 high quality bases) assembled on 2012-05-29
> FMO11777.5prime
CAGTCGACATGCCCAACGTGATCGTCAACCTGTCATTAATTTTCTTATTC
TTGGGTGGTATTTTCCATCTCAATGAAGCCCAGACAACGGATTGTTCGAA
TTCGTGTATTTTTCGAGCAAGATGCACTCCCTACTACAAGGATTTGGTCT
GGTCAGTGGTGGACCGCGTTTGTCGGGTCTTTCAAAACGGTTGCATCTTT
GCCAATGAAAATTGCATGAGAGCCAATCGCTGCTTGCCACCCATGGTAGC
CACCACAAAGGAAGAGTGTACGAAGGAGATCTACTGTCCAAGGTGGTGTT
CCCGAGGAGCTCCGCCGGTCTGCGCATGGTTTCCCTATACAGACAGTAAT
GGGAATACCGGAGGTCGAGACATGTCATTCGGAAGTCGCTGTCTACTAGA
CATGTATGCCTGCCGTAATGAACAGGCCTATGTCAACGAACCACGTATAG
GATCGTGCACAGCAAGCTTTCTAGACCAT
FMO11777.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42823-RA | 508 | CG34053-RB | 4..457 | 8..461 | 2270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:54:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17404874..17405106 | 240..8 | 1165 | 100 | Minus |
3R | 32079331 | 3R | 17404630..17404815 | 426..241 | 930 | 100 | Minus |
3R | 32079331 | 3R | 17404538..17404573 | 461..426 | 180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:54:51 has no hits.
FMO11777.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:22 Download gff for
FMO11777.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42823-RA | 2..460 | 7..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:03 Download gff for
FMO11777.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42823-RA | 2..460 | 7..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:24 Download gff for
FMO11777.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42823-RA | 2..460 | 7..465 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:24 Download gff for
FMO11777.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17404630..17404815 | 241..426 | 100 | <- | Minus |
3R | 17404874..17405109 | 1..240 | 98 | | Minus |
3R | 17404534..17404572 | 427..465 | 94 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:03 Download gff for
FMO11777.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13230256..13230294 | 427..465 | 94 | <- | Minus |
arm_3R | 13230352..13230537 | 241..426 | 100 | <- | Minus |
arm_3R | 13230596..13230831 | 1..240 | 98 | | Minus |