FMO11778.5prime Sequence
317 bp (317 high quality bases) assembled on 2012-05-29
> FMO11778.5prime
CAGTCGACATGGCAGAGAAGTCGAACGCGGATGCGAAGGCATCTAAAAAC
AACAAGTACATGACGAGCGAGGATCCTGAGCAGCCAAGTGAATCGTCCAC
CCAGAAGGAGAAGGGTTCGCAGTCTTCAGAGTCCGAGGAAGAATACTTTA
AGAATGTGTCCGAGCGCTTCGATAAGGACATAAAGGACCTGAAAGATCTG
ATTGCCCTGAATGAGAAGGAATGTAATAGGCTGTTATTCGATCGCCTCCT
GGATGTAATCAGAGTGGAAATAGAAGAAAAGCTACATTTGCCGAAGAAAG
CAAGCTTTCTAGACCAT
FMO11778.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| karr-RA | 466 | CG15323-RA | 100..390 | 9..299 | 1455 | 100 | Plus |
| CG42583-RA | 378 | CG42583-RA | 61..147 | 9..95 | 195 | 81.6 | Plus |
| CG34332-RA | 412 | CG34332-RA | 97..183 | 9..95 | 195 | 81.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:54:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20110186..20110476 | 299..9 | 1455 | 100 | Minus |
| X | 23542271 | X | 20139853..20139939 | 9..95 | 195 | 81.6 | Plus |
| X | 23542271 | X | 20141106..20141192 | 9..95 | 195 | 81.6 | Plus |
| X | 23542271 | X | 20096394..20096472 | 95..17 | 185 | 82.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:54:55 has no hits.
FMO11778.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:23 Download gff for
FMO11778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15323-RA | 97..390 | 6..299 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:05 Download gff for
FMO11778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15323-RA | 97..390 | 6..299 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:26 Download gff for
FMO11778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| karr-RA | 97..390 | 6..299 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:26 Download gff for
FMO11778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20110186..20110479 | 6..299 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:05 Download gff for
FMO11778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20004219..20004512 | 6..299 | 99 | | Minus |
