Clone FMO11782 Report

Search the DGRC for FMO11782

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:82
Vector:pMK33-CFH-BD
Associated Gene/Transcriptdro6-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11782.5prime Sequence

242 bp (242 high quality bases) assembled on 2012-05-29

> FMO11782.5prime
CAGTTGACATGATGCAAATCAAGTTCCTGTTCACCTTCCTCGCTCTGCTG
ATGATGGTCATCCTGGGCGCCAAGGAAGCCGATGCCGACTGCCTTTCCGG
AAGGTACAGAGGTCCCTGTGCCGTCTGGGACAACGAGACATGCAGGCGGG
TTTGCCGAGAGGAGGGACGAGGACGAGTGAGTGGTCACTGCAGTGCCAGG
CTGCAATGCTGGTGCGAAGGATGCGCAAGCTTTCTAGACCAT

FMO11782.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:36
Subject Length Description Subject Range Query Range Score Percent Strand
Drsl6-RA 387 CG32268-RA 57..272 9..224 1080 100 Plus
Drsl5-RA 364 CG10812-RA 55..261 12..224 455 82.2 Plus
Drs-RA 387 CG10810-RA 64..273 9..224 430 80.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:54:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3336147..3336362 224..9 1080 100 Minus
3L 28110227 3L 3316835..3317041 12..224 415 80.8 Plus
3L 28110227 3L 3369619..3369779 9..169 400 83.2 Plus
3L 28110227 3L 3314367..3314584 1..224 290 76.3 Plus
Blast to na_te.dros performed on 2014-11-28 02:54:35 has no hits.

FMO11782.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:19 Download gff for FMO11782.5prime
Subject Subject Range Query Range Percent Splice Strand
dro6-RA 57..282 9..236 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:50 Download gff for FMO11782.5prime
Subject Subject Range Query Range Percent Splice Strand
Drsl6-RA 57..282 9..236 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:16 Download gff for FMO11782.5prime
Subject Subject Range Query Range Percent Splice Strand
Drsl6-RA 57..282 9..236 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:16 Download gff for FMO11782.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3336137..3336362 9..236 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:50 Download gff for FMO11782.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3336137..3336362 9..236 98   Minus