FMO11784.5prime Sequence
442 bp (441 high quality bases) assembled on 2012-05-29
> FMO11784.5prime
CAGTCGACATGCCTCGCACCAAGATTACAGCTCGTCGTCAGGCCCAGCGC
CAGAAGGCTGATCGCGAAGAGAAAGTGCGCCTGTCCCAAATCAAAATGGA
TTCGGCTCTGGAGAAGATCGATGAGATGAGCAAGCGCTACAAGCAAGAGG
TGGACAACCAAATTAAGGTGATCCGTGGTAGGACTGATAAGCAGCTACTG
CAAATGAAGATGCCAGAATTCTTGGCTCTCGGGTTTAAGACTTTTGCCGA
ATTTCAGAGGGCAGCTATTAAGCCGCCCACAACTCGCAGTTTGTCCATCA
GTCGTGGTCGAACACGAACTCCGCAGAATGCCCTGCCACCGAGGCTTCAG
GCGCATTCGGTGGACAGGGCTCTGAGTGGCGACACCATGAGCTTTGTGCG
ATGGCCCCGCGCCGGAGAGATGGTGCTCTCGAAGGCGGGAAT
FMO11784.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aust-RB | 929 | CG17009-RB | 35..467 | 9..441 | 2165 | 100 | Plus |
| aust-RA | 889 | CG17009-RA | 35..467 | 9..441 | 2165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9250753..9251008 | 264..9 | 1280 | 100 | Minus |
| 2L | 23513712 | 2L | 9250510..9250689 | 441..262 | 900 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:01:02 has no hits.
FMO11784.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:37:35 Download gff for
FMO11784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aust-RA | 29..467 | 2..442 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:02 Download gff for
FMO11784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aust-RA | 29..467 | 2..442 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:45:37 Download gff for
FMO11784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aust-RA | 29..467 | 2..442 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:45:37 Download gff for
FMO11784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9250753..9251014 | 2..264 | 98 | | Minus |
| 2L | 9250509..9250686 | 265..442 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:02 Download gff for
FMO11784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9250753..9251014 | 2..264 | 98 | | Minus |
| arm_2L | 9250509..9250686 | 265..442 | 99 | <- | Minus |
