Clone FMO11792 Report

Search the DGRC for FMO11792

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:117
Well:92
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43098-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO11792.5prime Sequence

506 bp (506 high quality bases) assembled on 2012-05-29

> FMO11792.5prime
CAGTCGACATGAGCGCCAGAACTAGGCGCTACGAACGTGACGAAGTAGTG
CAGCTTCTTAGAAACCCATCAAATAAGCCCCAGCGAATTATATTAATATT
GGATTCAAGATTTATCCCTGAAGAACTGACGACCGCCAACCGTGTGAGGC
CTGACATTCACATATTTTCCGGACCTGCAATACCAAATTTGTTAGGCGGG
TCTTTCATGCCGCTGAATCTGTCCAATGCGAACTCGTGGGTGTACTCTGT
TCTATTGCAAAGTCCAATAGTTCGCCCTGCTTATCCTCGTCGAGTTCGCT
ACACTTCCGTGTCTCAGTGGAGTCCTCCAATGCGTACACGAATGGGACGG
AACGAGATTTTTCCGGAGGACATTGGAGGAGAGATACTGACGGCAATGAT
GGTGAACCCAGAATTAGACACACTAATGCGCCTCGATCCCATTAAAGCCA
TGTCCCTGATCCTGCGTATTGCAAACTACTTTCTCCACGCAAGCTTTCTA
GACCAT

FMO11792.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:55:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG43098-RA 657 CG43098-RA 65..544 9..488 2400 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:55:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3659132..3659611 9..488 2400 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:55:05 has no hits.

FMO11792.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-29 09:36:25 Download gff for FMO11792.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43098-RA 50..536 1..488 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:11 Download gff for FMO11792.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43098-RA 58..544 1..488 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:32 Download gff for FMO11792.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43098-RA 58..544 1..488 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:32 Download gff for FMO11792.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3659125..3659611 1..488 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:11 Download gff for FMO11792.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3659125..3659611 1..488 99   Plus